RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CHEK1O14757 476 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 MPDU1O75352 247 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 PAX9P55771 341 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 BTNL8Q6UX41 500 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 RNF125Q96EQ8 232 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 ALG5Q9Y673 324 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 hCG_2014768A0A024R1R8 64 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 SMCO3A2RU48 225 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 K7EIL1 84 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 SLC38A11Q08AI6 406 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 RAB32Q13637 225 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 TEPPQ6URK8 271 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 LILRB2Q8N423 598 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 PRR25Q96S07 402 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 WI2-2373I1.2A0A1W2PRP0 233 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 C11orf1Q9H5F2 150 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 UQCC1Q9NVA1 299 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 MLXQ9UH92 298 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 U3KQE9 123 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 H3BP45 60 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 IL4P05112 153 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 METTL15P1P0C7V9 234 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 MEOX2P50222 304 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 B9D2Q9BPU9 175 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 LSM4Q9Y4Z0 139 aaKnown RBP8.08□□□□□ -1.12
UBR4-208ENST00000459947 PMS2P5A8MQ11 134 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 IGHV3-48P01763 117 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 OXA1LQ15070 435 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 CYP2G1PQ6ZSU1 146 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 THAP6Q8TBB0 222 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 NEURL2Q9BR09 285 aa8.08□□□□□ -1.12
UBR4-208ENST00000459947 GIPP09681 153 aaPredicted RBP8.07□□□□□ -1.12
UBR4-208ENST00000459947 ADAMTSL5Q6ZMM2 481 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 TCF24Q7RTU0 167 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 STPG3Q8N7X2 389 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 PPP1R14BQ96C90 147 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 MRPL36Q9P0J6 103 aaKnown RBP8.07□□□□□ -1.12
UBR4-208ENST00000459947 IGHV3-35A0A0C4DH35 117 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 PSG1P11464 419 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 PLP1P60201 277 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 RAP2BP61225 183 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 DEFB121Q5J5C9 76 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 TMEM61Q8N0U2 210 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 TMEM252Q8N6L7 170 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 PRELID1Q9Y255 219 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 CHAC2Q8WUX2 184 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 TUBA4BQ9H853 241 aa8.07□□□□□ -1.12
UBR4-208ENST00000459947 CD81P60033 236 aa8.06□□□□□ -1.12
UBR4-208ENST00000459947 MLANAQ16655 118 aa8.06□□□□□ -1.12
UBR4-208ENST00000459947 C16orf54Q6UWD8 224 aa8.06□□□□□ -1.12
UBR4-208ENST00000459947 ZNF785A8K8V0 405 aa8.06□□□□□ -1.12
UBR4-208ENST00000459947 DNASE2O00115 360 aaPredicted RBP8.06□□□□□ -1.12
UBR4-208ENST00000459947 VWC2Q2TAL6 325 aa8.06□□□□□ -1.12
UBR4-208ENST00000459947 LYZP61626 148 aa8.06□□□□□ -1.12
UBR4-208ENST00000459947 OR1L4Q8NGR5 311 aa8.06□□□□□ -1.12
UBR4-208ENST00000459947 IGKV1D-37A0A075B6S9 117 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 MPC2O95563 127 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 RRAS2P62070 204 aaPredicted RBP8.05□□□□□ -1.12
UBR4-208ENST00000459947 OR1B1Q8NGR6 318 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 PPP1R1CQ8WVI7 109 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 FAM24AA6NFZ4 105 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 HYPMO75409 117 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 GALR1P47211 349 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 FAM90A2PQ658T7 463 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 ST8SIA2Q92186 375 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 PFDN5Q99471 154 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 RNF2Q99496 336 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 HIGD1AQ9Y241 93 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 WDR83OSQ9Y284 106 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 ZNF207O43670 478 aaKnown RBP8.05□□□□□ -1.12
UBR4-208ENST00000459947 LYL1P12980 280 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 ID1P41134 155 aa8.05□□□□□ -1.12
UBR4-208ENST00000459947 ELOA3CA0A087WX78 387 aaPredicted RBP8.04□□□□□ -1.12
UBR4-208ENST00000459947 OR11H12B2RN74 326 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 C17orf112F2Z3M2 114 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 PBDC1Q9BVG4 233 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 TMA7Q9Y2S6 64 aaKnown RBP8.04□□□□□ -1.12
UBR4-208ENST00000459947 SIX6O95475 246 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 EWSR1Q01844 656 aaKnown RBP eCLIP8.04□□□□□ -1.12
UBR4-208ENST00000459947 C11orf87Q6NUJ2 197 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 Q6ZRG5 221 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 ZNF709Q8N972 641 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 GLMPQ8WWB7 406 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 WDR89Q96FK6 387 aaPredicted RBP8.04□□□□□ -1.12
UBR4-208ENST00000459947 HSPB11Q9Y547 144 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 MGAM2Q2M2H8 2515 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 ATP6V1G1O75348 118 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 IFNA5P01569 189 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 ZNF414Q96IQ9 312 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 PARD6GQ9BYG4 376 aaPredicted RBP8.04□□□□□ -1.12
UBR4-208ENST00000459947 C19orf73Q9NVV2 129 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 DNHD1Q96M86 4753 aa8.04□□□□□ -1.12
UBR4-208ENST00000459947 UBE2CO00762 179 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 RPL7P18124 248 aaKnown RBP8.03□□□□□ -1.12
UBR4-208ENST00000459947 TMEM41BQ5BJD5 291 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 SIGLEC15Q6ZMC9 328 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 HAPLN4Q86UW8 402 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 CLEC5AQ9NY25 188 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 IGSF23A1L1A6 192 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 LINC00869P0C866 280 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms