RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 NPIPB3Q92617 1050 aa11.5□□□□□ -0.57
CHCHD3-204ENST00000457942 A0A0B4J2A0 478 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 RD3LP0DJH9 198 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 SPP1P10451 314 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 SMCO1Q147U7 214 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 USF2Q15853 346 aaPredicted RBP11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 TMEM41BQ5BJD5 291 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 MORN3Q6PF18 240 aaPredicted RBP11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 LYZL2Q7Z4W2 148 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 LGI3Q8N145 548 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 DCANP1Q8TF63 244 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 RBKSQ9H477 322 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 SHPKQ9UHJ6 478 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 ABCA13Q86UQ4 5058 aa11.49□□□□□ -0.57
CHCHD3-204ENST00000457942 TOMM40O96008 361 aa11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 IL7P13232 177 aa11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 SNRPD3P62318 126 aaKnown RBP11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 NMSQ5H8A3 153 aa11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 CENPSQ8N2Z9 138 aa11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 PBDC1Q9BVG4 233 aa11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 U3KQ87 197 aa11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 PKHD1P08F94 4074 aa11.48□□□□□ -0.57
CHCHD3-204ENST00000457942 ZFP92A6NM28 416 aa11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 C4BPBP20851 252 aa11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 SUPT4H1P63272 117 aaKnown RBP11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 SIGLEC15Q6ZMC9 328 aa11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 C2CD4CQ8TF44 421 aa11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 SLC35E1Q96K37 410 aa11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 HSPB7Q9UBY9 170 aa11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 PAIP2BQ9ULR5 123 aaKnown RBP11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 U3KQE9 123 aa11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 DNAH6Q9C0G6 4158 aa11.47□□□□□ -0.57
CHCHD3-204ENST00000457942 PIGBOS1A0A0B4J2F0 54 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 IGHV4-28A0A0C4DH34 117 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 PSG1P11464 419 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 VAMP1P23763 118 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 PRR20EP86478 221 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 PRR20CP86479 221 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 PRR20DP86480 221 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 PRR20BP86481 221 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 PRR20AP86496 221 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 OR51G1Q8NGK1 321 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 RNF125Q96EQ8 232 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 NRN1Q9NPD7 142 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 PFDN2Q9UHV9 154 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 FLVCR2Q9UPI3 526 aa11.46□□□□□ -0.57
CHCHD3-204ENST00000457942 FAM90A26D6RGX4 464 aa11.45□□□□□ -0.58
CHCHD3-204ENST00000457942 MIFP14174 115 aa11.45□□□□□ -0.58
CHCHD3-204ENST00000457942 NUP62P37198 522 aaPredicted RBP11.45□□□□□ -0.58
CHCHD3-204ENST00000457942 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
CHCHD3-204ENST00000457942 Q8NAQ8 132 aa11.45□□□□□ -0.58
CHCHD3-204ENST00000457942 RAB40CQ96S21 281 aa11.45□□□□□ -0.58
CHCHD3-204ENST00000457942 TBC1D24Q9ULP9 559 aa11.45□□□□□ -0.58
CHCHD3-204ENST00000457942 BUB3O43684 328 aa11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 FABP1P07148 127 aa11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 GIG44P09565 113 aaPredicted RBP11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 IAPPP10997 89 aa11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 BTCP35070 178 aa11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 LYZP61626 148 aa11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 NUTF2P61970 127 aaKnown RBP11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 RAB11AP62491 216 aa11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 PPP1R1AQ13522 171 aa11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 PPP1R14BQ96C90 147 aa11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 FAT2Q9NYQ8 4349 aa11.44□□□□□ -0.58
CHCHD3-204ENST00000457942 DUXBA0A1W2PPF3 345 aa11.43□□□□□ -0.58
CHCHD3-204ENST00000457942 IGLL5B9A064 214 aa11.43□□□□□ -0.58
CHCHD3-204ENST00000457942 ATP5IP56385 69 aaPredicted RBP11.43□□□□□ -0.58
CHCHD3-204ENST00000457942 SLC25A21Q9BQT8 299 aaPredicted RBP11.43□□□□□ -0.58
CHCHD3-204ENST00000457942 C1QTNF4Q9BXJ3 329 aa11.43□□□□□ -0.58
CHCHD3-204ENST00000457942 NAP1L6A6NFF2 107 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 C11orf94C9JXX5 98 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 PLA2G10O15496 165 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 NDUFB6O95139 128 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 RBMY1A1P0DJD3 496 aaKnown RBP11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 RBMY1CP0DJD4 496 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 HLA-DMBP28068 263 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 GPX4P36969 197 aaPredicted RBP11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 ZNF90Q03938 601 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 OR2F1Q13607 317 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 GAMTQ14353 236 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 RBMY1FQ15415 496 aaKnown RBP11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 TMEM128Q5BJH2 165 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 OR8G2PQ6IF36 304 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 DEDD2Q8WXF8 326 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 LINC00052Q96N35 136 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 PTTG2Q9NZH5 202 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 DNAH2Q9P225 4427 aa11.42□□□□□ -0.58
CHCHD3-204ENST00000457942 CENPXA8MT69 81 aa11.41□□□□□ -0.58
CHCHD3-204ENST00000457942 ZNF705EA8MWA4 302 aaPredicted RBP11.41□□□□□ -0.58
CHCHD3-204ENST00000457942 MED6O75586 246 aa11.41□□□□□ -0.58
CHCHD3-204ENST00000457942 SFT2D2O95562 160 aa11.41□□□□□ -0.58
CHCHD3-204ENST00000457942 ANXA7P20073 488 aaKnown RBP11.41□□□□□ -0.58
CHCHD3-204ENST00000457942 COQ8AQ8NI60 647 aa11.41□□□□□ -0.58
CHCHD3-204ENST00000457942 HRH4Q9H3N8 390 aa11.41□□□□□ -0.58
CHCHD3-204ENST00000457942 XCL2Q9UBD3 114 aa11.41□□□□□ -0.58
CHCHD3-204ENST00000457942 X6R8D5 127 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms