RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 LEMD1Q68G75 181 aa6.74□□□□□ -1.33
RIF1-208ENST00000457745 CLEC19AQ6UXS0 136 aa6.74□□□□□ -1.33
RIF1-208ENST00000457745 MRPL41Q8IXM3 137 aaKnown RBP6.74□□□□□ -1.33
RIF1-208ENST00000457745 LINC00052Q96N35 136 aa6.74□□□□□ -1.33
RIF1-208ENST00000457745 OR5B12Q96R08 314 aa6.74□□□□□ -1.33
RIF1-208ENST00000457745 CITED4Q96RK1 184 aa6.74□□□□□ -1.33
RIF1-208ENST00000457745 SLC25A2Q9BXI2 301 aa6.74□□□□□ -1.33
RIF1-208ENST00000457745 MAP1LC3BQ9GZQ8 125 aa6.74□□□□□ -1.33
RIF1-208ENST00000457745 MED9Q9NWA0 146 aa6.74□□□□□ -1.33
RIF1-208ENST00000457745 CTXND1A0A1B0GTU2 59 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 WI2-2373I1.2A0A1W2PRP0 233 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 CLPSL1A2RUU4 121 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 BTBD17A6NE02 478 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 UMAD1C9J7I0 102 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 TRIM77I1YAP6 450 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 CORTO00230 105 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 MPDU1O75352 247 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 SCAF4O95104 1147 aaKnown RBP6.73□□□□□ -1.33
RIF1-208ENST00000457745 IGHG4P01861 327 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 H2AFB1P0C5Y9 115 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 OR5G3P0C626 314 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 PSMB8P28062 276 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 CDC34P49427 236 aaPredicted RBP6.73□□□□□ -1.33
RIF1-208ENST00000457745 HILS1P60008 231 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 KRTAP10-3P60369 221 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 RAB14P61106 215 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 Q56UQ5 140 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 EIF5AL1Q6IS14 154 aaKnown RBP6.73□□□□□ -1.33
RIF1-208ENST00000457745 TMEM86BQ8N661 226 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 NECAP1Q8NC96 275 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 OR51G1Q8NGK1 321 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 MYOZ3Q8TDC0 251 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 VN1R17PQ8TDU5 208 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 SFT2D1Q8WV19 159 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 C17orf77Q96MU5 243 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 PRSS22Q9GZN4 317 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 NPFFR1Q9GZQ6 430 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 ZNF580Q9UK33 172 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 SELENOKQ9Y6D0 94 aa6.73□□□□□ -1.33
RIF1-208ENST00000457745 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 LOC102723971A0A1B0GUV8 181 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 ANKRD34BA5PLL1 514 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 C17orf112F2Z3M2 114 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 H3BTX0 84 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 BMPR1BO00238 502 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 ZNF207O43670 478 aaKnown RBP6.72□□□□□ -1.33
RIF1-208ENST00000457745 TOMM40O96008 361 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 APOHP02749 345 aaPredicted RBP6.72□□□□□ -1.33
RIF1-208ENST00000457745 CLEC3BP05452 202 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 RNASE1P07998 156 aaKnown RBP6.72□□□□□ -1.33
RIF1-208ENST00000457745 STAG3L2P0CL84 134 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 STAG3L3P0CL85 134 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 ARL14EPLP0DKL9 152 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 PYYP10082 97 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 RAB5CP51148 216 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 RAB9AP51151 201 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 MFAP4P55083 255 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 LYZP61626 148 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 BLOC1S1P78537 153 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 ICAM4Q14773 271 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 HAGHQ16775 308 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 ACOT6Q3I5F7 207 aaPredicted RBP6.72□□□□□ -1.33
RIF1-208ENST00000457745 FAM78BQ5VT40 261 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 ETFRF1Q6IPR1 90 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 UNQ9165/PRO28630Q6UXU0 137 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 ZNF491Q8N8L2 437 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 ZNF709Q8N972 641 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 OR1B1Q8NGR6 318 aa6.72□□□□□ -1.33
RIF1-208ENST00000457745 IGHV3-49A0A0A0MS15 119 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 CLDN34H7C241 214 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 MRPS12O15235 138 aaKnown RBP6.71□□□□□ -1.34
RIF1-208ENST00000457745 TGOLN2O43493 480 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 GNG7O60262 68 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 BRI3O95415 125 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 CD5P06127 495 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 FOSL1P15407 271 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 HIST1H1BP16401 226 aaKnown RBP6.71□□□□□ -1.34
RIF1-208ENST00000457745 ORM2P19652 201 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 HNF1AP20823 631 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 NPPCP23582 126 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 FCGR2BP31994 310 aaPredicted RBP6.71□□□□□ -1.34
RIF1-208ENST00000457745 ATP5G3P48201 142 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 PLP1P60201 277 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 ATP5G2Q06055 141 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 TOMM20LQ6UXN7 152 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 DPPA3Q6W0C5 159 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 OR1L6Q8NGR2 347 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 MARC2Q969Z3 335 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 TMEM68Q96MH6 324 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 FAM210AQ96ND0 272 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 ACTR3CQ9C0K3 210 aaPredicted RBP6.71□□□□□ -1.34
RIF1-208ENST00000457745 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
RIF1-208ENST00000457745 MRPL27Q9P0M9 148 aaKnown RBP6.71□□□□□ -1.34
RIF1-208ENST00000457745 FUT9Q9Y231 359 aa6.71□□□□□ -1.34
RIF1-208ENST00000457745 YTHDF2Q9Y5A9 579 aaKnown RBP6.71□□□□□ -1.34
RIF1-208ENST00000457745 PUS1Q9Y606 427 aaKnown RBP eCLIP6.71□□□□□ -1.34
RIF1-208ENST00000457745 IGHV3OR16-13A0A075B7E8 117 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.7□□□□□ -1.34
RIF1-208ENST00000457745 IGHV3-74A0A0B4J1X5 117 aa6.7□□□□□ -1.34
RIF1-208ENST00000457745 H3BRN7 92 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms