RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 UQCRFS1P47985 274 aa13.23□□□□□ -0.29
CCDC43-202ENST00000457422 FAM231DQ6ZW35 169 aa13.23□□□□□ -0.29
CCDC43-202ENST00000457422 LINC00479Q96M42 142 aa13.23□□□□□ -0.29
CCDC43-202ENST00000457422 K7EIM0 57 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 MGST1P10620 155 aaKnown RBP13.22□□□□□ -0.29
CCDC43-202ENST00000457422 PSG1P11464 419 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 CX3CL1P78423 397 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 RPL19P84098 196 aaKnown RBP13.22□□□□□ -0.29
CCDC43-202ENST00000457422 JOSD1Q15040 202 aaPredicted RBP13.22□□□□□ -0.29
CCDC43-202ENST00000457422 CCDC144NLQ6NUI1 221 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 VMO1Q7Z5L0 202 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 OR8I2Q8N0Y5 310 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 ITLN2Q8WWU7 325 aaPredicted RBP13.22□□□□□ -0.29
CCDC43-202ENST00000457422 CBLN1P23435 193 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 ZFP36P26651 326 aaKnown RBP13.22□□□□□ -0.29
CCDC43-202ENST00000457422 FXYD3Q14802 87 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 TMEM183BQ1AE95 376 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 C5orf64Q2M2E5 130 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 MINOS1Q5TGZ0 78 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 NHLRC2Q8NBF2 726 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 OR5R1Q8NH85 324 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 TMEM18Q96B42 140 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 GNB1LQ9BYB4 327 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 EPDR1Q9UM22 224 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 MINOS1-NBL1R4GNA1 71 aa13.22□□□□□ -0.29
CCDC43-202ENST00000457422 SMIM27A0A1W2PRY6 76 aa13.21□□□□□ -0.29
CCDC43-202ENST00000457422 RANP62826 216 aaKnown RBP13.21□□□□□ -0.29
CCDC43-202ENST00000457422 HES1Q14469 280 aa13.21□□□□□ -0.29
CCDC43-202ENST00000457422 COX19Q49B96 90 aa13.21□□□□□ -0.29
CCDC43-202ENST00000457422 GBGT1Q8N5D6 347 aa13.21□□□□□ -0.29
CCDC43-202ENST00000457422 BLNKQ8WV28 456 aa13.21□□□□□ -0.29
CCDC43-202ENST00000457422 SMIM12Q96EX1 92 aa13.21□□□□□ -0.29
CCDC43-202ENST00000457422 RASL11BQ9BPW5 248 aa13.21□□□□□ -0.29
CCDC43-202ENST00000457422 MRPL18Q9H0U6 180 aaKnown RBP13.21□□□□□ -0.29
CCDC43-202ENST00000457422 PRDM13Q9H4Q3 707 aa13.21□□□□□ -0.29
CCDC43-202ENST00000457422 KLF12Q9Y4X4 402 aa13.21□□□□□ -0.29
CCDC43-202ENST00000457422 IGKV1-17P01599 117 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 HOXB4P17483 251 aaPredicted RBP13.2□□□□□ -0.3
CCDC43-202ENST00000457422 GNG5P63218 68 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 EBI3Q14213 229 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 BAGE2Q86Y30 109 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 Q8N6K4 173 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 FAM103A1Q9BTL3 118 aaKnown RBP13.2□□□□□ -0.3
CCDC43-202ENST00000457422 TMEM14CQ9P0S9 112 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 TRAV34A0A0B4J273 112 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 MT-ND6P03923 174 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 GNLYP22749 145 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 LYZP61626 148 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 DYNAPQ8N1N2 210 aa13.2□□□□□ -0.3
CCDC43-202ENST00000457422 MRPL27Q9P0M9 148 aaKnown RBP13.2□□□□□ -0.3
CCDC43-202ENST00000457422 PGPA6NDG6 321 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 C19orf84I3L1E1 186 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 SLC25A5P05141 298 aaKnown RBP13.19□□□□□ -0.3
CCDC43-202ENST00000457422 IER3P46695 156 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 EFNA4P52798 201 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 WDR73Q6P4I2 378 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 C5orf17Q8NAS9 161 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 MBD6Q96DN6 1003 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 SLC25A39Q9BZJ4 359 aaPredicted RBP13.19□□□□□ -0.3
CCDC43-202ENST00000457422 SIRPDQ9H106 197 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 NPIPB5A8MRT5 1133 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 ZNF705GA8MUZ8 300 aaPredicted RBP13.19□□□□□ -0.3
CCDC43-202ENST00000457422 SNURFLB1AK76 121 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 FRMD6-AS1P0C7T7 363 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 ATG101Q9BSB4 218 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 C7orf69Q9H7B7 122 aa13.19□□□□□ -0.3
CCDC43-202ENST00000457422 RD3LP0DJH9 198 aa13.18□□□□□ -0.3
CCDC43-202ENST00000457422 GZMBP10144 247 aa13.18□□□□□ -0.3
CCDC43-202ENST00000457422 ZNF600Q6ZNG1 722 aa13.18□□□□□ -0.3
CCDC43-202ENST00000457422 TMEM190Q8WZ59 177 aa13.18□□□□□ -0.3
CCDC43-202ENST00000457422 ABCA1O95477 2261 aa13.18□□□□□ -0.3
CCDC43-202ENST00000457422 A0A1B0GUS0 222 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 TCL1AP56279 114 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 UBE2G1P62253 170 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 ZNF48Q96MX3 618 aaPredicted RBP13.17□□□□□ -0.3
CCDC43-202ENST00000457422 CHRDL1Q9BU40 450 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 H3BTX0 84 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 TOMM40O96008 361 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 ASPHD1Q5U4P2 390 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 TMEM256Q8N2U0 113 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 ARPC1AQ92747 370 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 RBM14Q96PK6 669 aaKnown RBP13.17□□□□□ -0.3
CCDC43-202ENST00000457422 Q9H3A6 140 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 SERTAD4Q9NUC0 356 aa13.17□□□□□ -0.3
CCDC43-202ENST00000457422 TBL2Q9Y4P3 447 aaKnown RBP13.17□□□□□ -0.3
CCDC43-202ENST00000457422 IGLV11-55A0A075B6I3 123 aa13.16□□□□□ -0.3
CCDC43-202ENST00000457422 IGHV2-70DA0A0C4DH43 119 aa13.16□□□□□ -0.3
CCDC43-202ENST00000457422 IZUMO1RA6ND01 250 aa13.16□□□□□ -0.3
CCDC43-202ENST00000457422 GATCO43716 136 aaKnown RBP13.16□□□□□ -0.3
CCDC43-202ENST00000457422 HIST1H1EP10412 219 aaKnown RBP13.16□□□□□ -0.3
CCDC43-202ENST00000457422 ESDP10768 282 aa13.16□□□□□ -0.3
CCDC43-202ENST00000457422 KLF17Q5JT82 389 aaPredicted RBP13.16□□□□□ -0.3
CCDC43-202ENST00000457422 TMEM136Q6ZRR5 245 aa13.16□□□□□ -0.3
CCDC43-202ENST00000457422 FMC1Q96HJ9 113 aa13.16□□□□□ -0.3
CCDC43-202ENST00000457422 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
CCDC43-202ENST00000457422 GPR82Q96P67 336 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 895.2 ms