RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 IGKV3-20P01619 116 aa11.96□□□□□ -0.49
TVP23A-202ENST00000456096 ZNF705DP0CH99 300 aaPredicted RBP11.96□□□□□ -0.49
TVP23A-202ENST00000456096 ZNF705BP0CI00 300 aaPredicted RBP11.96□□□□□ -0.49
TVP23A-202ENST00000456096 SPART-AS1P0CW21 52 aa11.96□□□□□ -0.49
TVP23A-202ENST00000456096 PSG1P11464 419 aa11.96□□□□□ -0.49
TVP23A-202ENST00000456096 NKX2-1P43699 371 aaPredicted RBP11.96□□□□□ -0.49
TVP23A-202ENST00000456096 FXYD7P58549 80 aa11.96□□□□□ -0.49
TVP23A-202ENST00000456096 LGALS9BQ3B8N2 356 aa11.96□□□□□ -0.49
TVP23A-202ENST00000456096 TMEM268Q5VZI3 342 aa11.96□□□□□ -0.49
TVP23A-202ENST00000456096 NEU1Q99519 415 aa11.96□□□□□ -0.49
TVP23A-202ENST00000456096 IFNA10P01566 189 aa11.95□□□□□ -0.5
TVP23A-202ENST00000456096 ZNF182P17025 639 aaPredicted RBP11.95□□□□□ -0.5
TVP23A-202ENST00000456096 C15orf40Q8WUR7 153 aa11.95□□□□□ -0.5
TVP23A-202ENST00000456096 LINC00052Q96N35 136 aa11.95□□□□□ -0.5
TVP23A-202ENST00000456096 NAA50Q9GZZ1 169 aaKnown RBP11.95□□□□□ -0.5
TVP23A-202ENST00000456096 ABCA13Q86UQ4 5058 aa11.95□□□□□ -0.5
TVP23A-202ENST00000456096 IGHV3OR16-12A0A075B7B8 117 aa11.94□□□□□ -0.5
TVP23A-202ENST00000456096 SMIM9A6NGZ8 99 aa11.94□□□□□ -0.5
TVP23A-202ENST00000456096 GABARAPH6UMI1 98 aa11.94□□□□□ -0.5
TVP23A-202ENST00000456096 GABARAPO95166 117 aa11.94□□□□□ -0.5
TVP23A-202ENST00000456096 NMSQ5H8A3 153 aa11.94□□□□□ -0.5
TVP23A-202ENST00000456096 GPR107Q5VW38 600 aa11.94□□□□□ -0.5
TVP23A-202ENST00000456096 NOXA1Q86UR1 476 aa11.94□□□□□ -0.5
TVP23A-202ENST00000456096 WDR12Q9GZL7 423 aaKnown RBP11.94□□□□□ -0.5
TVP23A-202ENST00000456096 TMEM56-RWDD3S4R434 201 aa11.94□□□□□ -0.5
TVP23A-202ENST00000456096 HSPG2P98160 4391 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 IGLV2-18A0A075B6J9 118 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 TMEM189A5PLL7 270 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 CRYM-AS1A6NIL9 109 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 IFNA21P01568 189 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 SURF2Q15527 256 aaPredicted RBP11.93□□□□□ -0.5
TVP23A-202ENST00000456096 CTF1Q16619 201 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 UBE2DNLQ8IWF7 75 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 RNF125Q96EQ8 232 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 PBDC1Q9BVG4 233 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 SAV1Q9H4B6 383 aaPredicted RBP11.93□□□□□ -0.5
TVP23A-202ENST00000456096 PLA2G2EQ9NZK7 142 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 DKK2Q9UBU2 259 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 RFNGQ9Y644 331 aa11.93□□□□□ -0.5
TVP23A-202ENST00000456096 DISC1C4P0D8 188 aa11.92□□□□□ -0.5
TVP23A-202ENST00000456096 SULT1A3P0DMM9 295 aa11.92□□□□□ -0.5
TVP23A-202ENST00000456096 SULT1A4P0DMN0 295 aa11.92□□□□□ -0.5
TVP23A-202ENST00000456096 SSBP1Q04837 148 aaKnown RBP11.92□□□□□ -0.5
TVP23A-202ENST00000456096 KLF9Q13886 244 aaPredicted RBP11.92□□□□□ -0.5
TVP23A-202ENST00000456096 GSG1LQ6UXU4 331 aa11.92□□□□□ -0.5
TVP23A-202ENST00000456096 ZNF709Q8N972 641 aa11.92□□□□□ -0.5
TVP23A-202ENST00000456096 MIXL1Q9H2W2 232 aa11.92□□□□□ -0.5
TVP23A-202ENST00000456096 PRR13Q9NZ81 148 aa11.92□□□□□ -0.5
TVP23A-202ENST00000456096 U3KQ87 197 aa11.92□□□□□ -0.5
TVP23A-202ENST00000456096 NUP62P37198 522 aaPredicted RBP11.91□□□□□ -0.5
TVP23A-202ENST00000456096 ID1P41134 155 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 ZNF90Q03938 601 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 FAM222AQ5U5X8 452 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 FOXI2Q6ZQN5 318 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 Q6ZR54 194 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 LGI3Q8N145 548 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 OR4B1Q8NGF8 309 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 FAM210BQ96KR6 192 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 NIPSNAP3BQ9BS92 247 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 SLC35B3Q9H1N7 401 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 CACFD1Q9UGQ2 172 aa11.91□□□□□ -0.5
TVP23A-202ENST00000456096 ZFP92A6NM28 416 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 SOCS3O14543 225 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 HTN3P15516 51 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 PSMB3P49720 205 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 OR8G2PQ6IF36 304 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 OR4C16Q8NGL9 310 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 IL22RA2Q969J5 263 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 CLUHP3Q96NS8 147 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 RBKSQ9H477 322 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 PFDN2Q9UHV9 154 aa11.9□□□□□ -0.5
TVP23A-202ENST00000456096 IGKV1D-37A0A075B6S9 117 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 CTDSP2O14595 271 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 RGS5O15539 181 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 MRPS10P82664 201 aaKnown RBP11.89□□□□□ -0.51
TVP23A-202ENST00000456096 GAMTQ14353 236 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 ZNF79Q15937 498 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 OR51S1Q8NGJ8 323 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 COQ8AQ8NI60 647 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 SMIM4Q8WVI0 70 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 HSPB7Q9UBY9 170 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 KCNIP3Q9Y2W7 256 aa11.89□□□□□ -0.51
TVP23A-202ENST00000456096 NACAE9PAV3 2078 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 F6UB75 175 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 AKAIN1P0CW23 69 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 GPX4P36969 197 aaPredicted RBP11.88□□□□□ -0.51
TVP23A-202ENST00000456096 LYZP61626 148 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 SUPT4H1P63272 117 aaKnown RBP11.88□□□□□ -0.51
TVP23A-202ENST00000456096 PSG9Q00887 426 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 RNF212Q495C1 297 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 C1orf194Q5T5A4 169 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 SPATA31B1PQ5VZV4 182 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 LYZL2Q7Z4W2 148 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 C1orf158Q8N1D5 194 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 PRRT1Q99946 306 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 GOLT1BQ9Y3E0 138 aa11.88□□□□□ -0.51
TVP23A-202ENST00000456096 A0A0B4J2A0 478 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 TEX48A0A1B0GUV7 120 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms