RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 IGHV3-66A0A0C4DH42 116 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 FABP1P07148 127 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 P2RY1P47900 373 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 PAX9P55771 341 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 CMC4P56277 68 aaPredicted RBP12.88□□□□□ -0.35
USP39-208ENST00000455732 TAS2R30P59541 319 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 MUC7Q8TAX7 377 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 GRAMD2BQ96HH9 432 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 TRGV9Q99603 122 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 GGTLC1Q9BX51 225 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 MS4A6AQ9H2W1 248 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 EDA2RQ9HAV5 297 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 PSENENQ9NZ42 101 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 UBQLN2Q9UHD9 624 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 RCL1Q9Y2P8 373 aaKnown RBP12.88□□□□□ -0.35
USP39-208ENST00000455732 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
USP39-208ENST00000455732 IGKV1OR2-108A0A075B7D4 117 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
USP39-208ENST00000455732 CCSO14618 274 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 TSC22D2O75157 780 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 SCGB1D2O95969 90 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 MBPP02686 304 aaPredicted RBP12.87□□□□□ -0.35
USP39-208ENST00000455732 ZNF90Q03938 601 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 OR8G2PQ6IF36 304 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 ACOT7LQ6ZUV0 252 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 RNF125Q96EQ8 232 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 GSKIPQ9P0R6 139 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 RABAC1Q9UI14 185 aa12.87□□□□□ -0.35
USP39-208ENST00000455732 PMS2P5A8MQ11 134 aa12.86□□□□□ -0.35
USP39-208ENST00000455732 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
USP39-208ENST00000455732 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
USP39-208ENST00000455732 TMEM14EPQ6UXP3 125 aa12.86□□□□□ -0.35
USP39-208ENST00000455732 NRARPQ7Z6K4 114 aa12.86□□□□□ -0.35
USP39-208ENST00000455732 GLMPQ8WWB7 406 aa12.86□□□□□ -0.35
USP39-208ENST00000455732 IGKV3-7A0A075B6H7 116 aa12.85□□□□□ -0.35
USP39-208ENST00000455732 HELTA6NFD8 242 aa12.85□□□□□ -0.35
USP39-208ENST00000455732 TFPI2P48307 235 aa12.85□□□□□ -0.35
USP39-208ENST00000455732 EIF2B2P49770 351 aaKnown RBP12.85□□□□□ -0.35
USP39-208ENST00000455732 DEFA1P59665 94 aa12.85□□□□□ -0.35
USP39-208ENST00000455732 DEFA3P59666 94 aa12.85□□□□□ -0.35
USP39-208ENST00000455732 RPL11P62913 178 aaKnown RBP12.85□□□□□ -0.35
USP39-208ENST00000455732 GBGT1Q8N5D6 347 aa12.85□□□□□ -0.35
USP39-208ENST00000455732 MAP6D1Q9H9H5 199 aa12.85□□□□□ -0.35
USP39-208ENST00000455732 C5orf51A6NDU8 294 aa12.84□□□□□ -0.35
USP39-208ENST00000455732 FAM25EA8MYX2 175 aa12.84□□□□□ -0.35
USP39-208ENST00000455732 FNDC10F2Z333 226 aa12.84□□□□□ -0.35
USP39-208ENST00000455732 DNASE2O00115 360 aaPredicted RBP12.84□□□□□ -0.35
USP39-208ENST00000455732 BUB3O43684 328 aa12.84□□□□□ -0.35
USP39-208ENST00000455732 PRAF2O60831 178 aa12.84□□□□□ -0.35
USP39-208ENST00000455732 CFDP00746 253 aaPredicted RBP12.84□□□□□ -0.35
USP39-208ENST00000455732 CASC10Q5T4H9 136 aa12.84□□□□□ -0.35
USP39-208ENST00000455732 C2orf50Q96LR7 162 aa12.84□□□□□ -0.35
USP39-208ENST00000455732 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
USP39-208ENST00000455732 RETNQ9HD89 108 aa12.84□□□□□ -0.35
USP39-208ENST00000455732 PFDN2Q9UHV9 154 aa12.84□□□□□ -0.35
USP39-208ENST00000455732 TENM2Q9NT68 2774 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 KIR2DL5BA0A0G2JN68 375 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 KIR2DL5BA0A0G2JPC4 375 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 C7orf66A4D0T2 115 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 SNRPGP15A8MWD9 76 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 K7EQG2 157 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 AP2S1P53680 142 aaPredicted RBP12.83□□□□□ -0.36
USP39-208ENST00000455732 DLK1P80370 383 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 AKR1C1Q04828 323 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 TMEM144Q7Z5S9 345 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 KIR2DL5AQ8N109 375 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 KIR2DL5BQ8NHK3 375 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 DCANP1Q8TF63 244 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 MARVELD1Q9BSK0 173 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 PBDC1Q9BVG4 233 aa12.83□□□□□ -0.36
USP39-208ENST00000455732 K7EPK0 472 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 METTL15P1P0C7V9 234 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 APOC4P55056 127 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 IL15RAQ13261 267 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 GSG1LQ6UXU4 331 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 WFDC3Q8IUB2 231 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 APRG1Q8IVJ8 170 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 STXBP6Q8NFX7 210 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 C11orf1Q9H5F2 150 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 SLC45A2Q9UMX9 530 aa12.82□□□□□ -0.36
USP39-208ENST00000455732 INMT-MINDY4F8WBC2 141 aa12.81□□□□□ -0.36
USP39-208ENST00000455732 UBE2CO00762 179 aa12.81□□□□□ -0.36
USP39-208ENST00000455732 CCNKO75909 580 aa12.81□□□□□ -0.36
USP39-208ENST00000455732 LYZP61626 148 aa12.81□□□□□ -0.36
USP39-208ENST00000455732 OR2F1Q13607 317 aa12.81□□□□□ -0.36
USP39-208ENST00000455732 C1orf194Q5T5A4 169 aa12.81□□□□□ -0.36
USP39-208ENST00000455732 FAM24BQ8N5W8 94 aa12.81□□□□□ -0.36
USP39-208ENST00000455732 OR10P1Q8NGE3 313 aa12.81□□□□□ -0.36
USP39-208ENST00000455732 GGACTQ9BVM4 153 aa12.81□□□□□ -0.36
USP39-208ENST00000455732 L7N2F9 121 aa12.8□□□□□ -0.36
USP39-208ENST00000455732 LYL1P12980 280 aa12.8□□□□□ -0.36
USP39-208ENST00000455732 VAMP2P63027 116 aa12.8□□□□□ -0.36
USP39-208ENST00000455732 SIGLEC15Q6ZMC9 328 aa12.8□□□□□ -0.36
USP39-208ENST00000455732 Q6ZWC4 215 aa12.8□□□□□ -0.36
USP39-208ENST00000455732 BPIFCQ8NFQ6 507 aa12.8□□□□□ -0.36
USP39-208ENST00000455732 SEPSECSQ9HD40 501 aaKnown RBP12.8□□□□□ -0.36
USP39-208ENST00000455732 NRN1Q9NPD7 142 aa12.8□□□□□ -0.36
USP39-208ENST00000455732 LSM5Q9Y4Y9 91 aaKnown RBP12.8□□□□□ -0.36
USP39-208ENST00000455732 STARD9Q9P2P6 4700 aa12.8□□□□□ -0.36
USP39-208ENST00000455732 DYNC2H1Q8NCM8 4307 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms