RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 RCVRNP35243 200 aa16.27■□□□□ 0.2
PTPRA-208ENST00000455631 FAM78BQ5VT40 261 aa16.27■□□□□ 0.2
PTPRA-208ENST00000455631 EBLN2Q6P2I7 272 aa16.27■□□□□ 0.2
PTPRA-208ENST00000455631 RNASEH2CQ8TDP1 164 aaKnown RBP16.27■□□□□ 0.2
PTPRA-208ENST00000455631 GPX8Q8TED1 209 aa16.27■□□□□ 0.2
PTPRA-208ENST00000455631 NPIPB3Q92617 1050 aa16.27■□□□□ 0.2
PTPRA-208ENST00000455631 ACY3Q96HD9 319 aa16.27■□□□□ 0.2
PTPRA-208ENST00000455631 HEYLQ9NQ87 328 aaPredicted RBP16.27■□□□□ 0.2
PTPRA-208ENST00000455631 C3orf85A0A1B0GTC6 90 aa16.26■□□□□ 0.19
PTPRA-208ENST00000455631 DEFB130BP0DP73 79 aa16.26■□□□□ 0.19
PTPRA-208ENST00000455631 DEFB130AP0DP74 79 aa16.26■□□□□ 0.19
PTPRA-208ENST00000455631 NUP62P37198 522 aaPredicted RBP16.26■□□□□ 0.19
PTPRA-208ENST00000455631 SPCS3P61009 180 aa16.26■□□□□ 0.19
PTPRA-208ENST00000455631 SPATA31B1PQ5VZV4 182 aa16.26■□□□□ 0.19
PTPRA-208ENST00000455631 SLC24A4Q8NFF2 622 aa16.26■□□□□ 0.19
PTPRA-208ENST00000455631 PBDC1Q9BVG4 233 aa16.26■□□□□ 0.19
PTPRA-208ENST00000455631 INAFM2P0DMQ5 153 aa16.25■□□□□ 0.19
PTPRA-208ENST00000455631 PSG1P11464 419 aa16.25■□□□□ 0.19
PTPRA-208ENST00000455631 PAX9P55771 341 aa16.25■□□□□ 0.19
PTPRA-208ENST00000455631 SP6Q3SY56 376 aa16.25■□□□□ 0.19
PTPRA-208ENST00000455631 C2orf83Q53S99 150 aa16.25■□□□□ 0.19
PTPRA-208ENST00000455631 ETFRF1Q6IPR1 90 aa16.25■□□□□ 0.19
PTPRA-208ENST00000455631 CROCCP3Q8IVE0 287 aa16.25■□□□□ 0.19
PTPRA-208ENST00000455631 RNF125Q96EQ8 232 aa16.25■□□□□ 0.19
PTPRA-208ENST00000455631 ZNF486Q96H40 463 aaPredicted RBP16.25■□□□□ 0.19
PTPRA-208ENST00000455631 LYRM9A8MSI8 78 aa16.24■□□□□ 0.19
PTPRA-208ENST00000455631 SOCS3O14543 225 aa16.24■□□□□ 0.19
PTPRA-208ENST00000455631 NXPH3O95157 252 aa16.24■□□□□ 0.19
PTPRA-208ENST00000455631 GPR146Q96CH1 333 aa16.24■□□□□ 0.19
PTPRA-208ENST00000455631 PRM2P04554 102 aa16.23■□□□□ 0.19
PTPRA-208ENST00000455631 CLINT1Q14677 625 aa16.23■□□□□ 0.19
PTPRA-208ENST00000455631 PFDN2Q9UHV9 154 aa16.23■□□□□ 0.19
PTPRA-208ENST00000455631 A0A0J9YX75 114 aa16.22■□□□□ 0.19
PTPRA-208ENST00000455631 ZNF705GA8MUZ8 300 aaPredicted RBP16.22■□□□□ 0.19
PTPRA-208ENST00000455631 TGFBR1P36897 503 aa16.22■□□□□ 0.19
PTPRA-208ENST00000455631 SSX7Q7RTT5 188 aa16.22■□□□□ 0.19
PTPRA-208ENST00000455631 SNX29P2Q8IUI4 249 aa16.22■□□□□ 0.19
PTPRA-208ENST00000455631 OR52E5Q8NH55 327 aa16.22■□□□□ 0.19
PTPRA-208ENST00000455631 IGF2BP2-AS1Q96M15 143 aa16.22■□□□□ 0.19
PTPRA-208ENST00000455631 CEBPZOSA8MTT3 80 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 TTC32Q5I0X7 151 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 OR8G2PQ6IF36 304 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 OR4C16Q8NGL9 310 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 RNF141Q8WVD5 230 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 TMEM170AQ8WVE7 144 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 KRTAP1-5Q9BYS1 174 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 Q9H8V8 135 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.21■□□□□ 0.19
PTPRA-208ENST00000455631 COPZ2Q9P299 210 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 RAB26Q9ULW5 256 aa16.21■□□□□ 0.19
PTPRA-208ENST00000455631 ISLRO14498 428 aa16.2■□□□□ 0.18
PTPRA-208ENST00000455631 UCP1P25874 307 aa16.2■□□□□ 0.18
PTPRA-208ENST00000455631 SUPT4H1P63272 117 aaKnown RBP16.2■□□□□ 0.18
PTPRA-208ENST00000455631 AARDQ4LEZ3 155 aa16.2■□□□□ 0.18
PTPRA-208ENST00000455631 ABHD1Q96SE0 405 aa16.2■□□□□ 0.18
PTPRA-208ENST00000455631 RPRMQ9NS64 109 aa16.2■□□□□ 0.18
PTPRA-208ENST00000455631 DOK5Q9P104 306 aa16.2■□□□□ 0.18
PTPRA-208ENST00000455631 ATP5G1P05496 136 aa16.19■□□□□ 0.18
PTPRA-208ENST00000455631 ATP5G3P48201 142 aa16.19■□□□□ 0.18
PTPRA-208ENST00000455631 DLK1P80370 383 aa16.19■□□□□ 0.18
PTPRA-208ENST00000455631 FCN2Q15485 313 aa16.19■□□□□ 0.18
PTPRA-208ENST00000455631 CCDC71LQ8N9Z2 235 aa16.19■□□□□ 0.18
PTPRA-208ENST00000455631 INSP01308 110 aa16.18■□□□□ 0.18
PTPRA-208ENST00000455631 BTF3P20290 206 aaKnown RBP16.18■□□□□ 0.18
PTPRA-208ENST00000455631 NEDD8Q15843 81 aa16.18■□□□□ 0.18
PTPRA-208ENST00000455631 LHFPL1Q86WI0 220 aa16.18■□□□□ 0.18
PTPRA-208ENST00000455631 FAM219AQ8IW50 185 aa16.18■□□□□ 0.18
PTPRA-208ENST00000455631 C20orf173Q96LM9 149 aa16.18■□□□□ 0.18
PTPRA-208ENST00000455631 CACNG5Q9UF02 275 aa16.18■□□□□ 0.18
PTPRA-208ENST00000455631 SMIM31A0A1B0GVY4 71 aa16.17■□□□□ 0.18
PTPRA-208ENST00000455631 LYZP61626 148 aa16.17■□□□□ 0.18
PTPRA-208ENST00000455631 SPINK13Q1W4C9 94 aa16.17■□□□□ 0.18
PTPRA-208ENST00000455631 RNASE10Q5GAN6 216 aaKnown RBP16.17■□□□□ 0.18
PTPRA-208ENST00000455631 C1orf194Q5T5A4 169 aa16.17■□□□□ 0.18
PTPRA-208ENST00000455631 AMTNQ6UX39 209 aa16.17■□□□□ 0.18
PTPRA-208ENST00000455631 PPP1R14BQ96C90 147 aa16.17■□□□□ 0.18
PTPRA-208ENST00000455631 M0R2Z0 102 aa16.16■□□□□ 0.18
PTPRA-208ENST00000455631 RPS19P39019 145 aaKnown RBP16.16■□□□□ 0.18
PTPRA-208ENST00000455631 RNASE12Q5GAN4 147 aaKnown RBP16.16■□□□□ 0.18
PTPRA-208ENST00000455631 NOXA1Q86UR1 476 aa16.16■□□□□ 0.18
PTPRA-208ENST00000455631 OR8I2Q8N0Y5 310 aa16.16■□□□□ 0.18
PTPRA-208ENST00000455631 C16orf92Q96LL3 132 aa16.16■□□□□ 0.18
PTPRA-208ENST00000455631 Q9H3A6 140 aa16.16■□□□□ 0.18
PTPRA-208ENST00000455631 ZFP92A6NM28 416 aa16.15■□□□□ 0.18
PTPRA-208ENST00000455631 ELK1P19419 428 aa16.15■□□□□ 0.18
PTPRA-208ENST00000455631 ZNF90Q03938 601 aa16.15■□□□□ 0.18
PTPRA-208ENST00000455631 KLF9Q13886 244 aaPredicted RBP16.15■□□□□ 0.18
PTPRA-208ENST00000455631 SAMD13Q5VXD3 122 aa16.15■□□□□ 0.18
PTPRA-208ENST00000455631 PLAC8L1A1L4L8 177 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 CBY3A6NI87 242 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 A8MTW9 85 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 TSPOP30536 169 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 NMSQ5H8A3 153 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 Q5VSD8 79 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 BAP18Q8IXM2 172 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 ARRDC1Q8N5I2 433 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 OR13C8Q8NGS7 320 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 ZFAND1Q8TCF1 268 aa16.14■□□□□ 0.17
PTPRA-208ENST00000455631 CRXO43186 299 aaPredicted RBP16.13■□□□□ 0.17
PTPRA-208ENST00000455631 B3GALNT1O75752 331 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms