RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 FXYD7P58549 80 aa13.24□□□□□ -0.29
MSH6-206ENST00000455383 RNASE12Q5GAN4 147 aaKnown RBP13.24□□□□□ -0.29
MSH6-206ENST00000455383 C1orf134Q5TEV5 83 aa13.24□□□□□ -0.29
MSH6-206ENST00000455383 GPR146Q96CH1 333 aa13.24□□□□□ -0.29
MSH6-206ENST00000455383 ABHD1Q96SE0 405 aa13.24□□□□□ -0.29
MSH6-206ENST00000455383 WDR12Q9GZL7 423 aaKnown RBP13.24□□□□□ -0.29
MSH6-206ENST00000455383 CACNG5Q9UF02 275 aa13.24□□□□□ -0.29
MSH6-206ENST00000455383 IGHV3OR16-12A0A075B7B8 117 aa13.23□□□□□ -0.29
MSH6-206ENST00000455383 SOCS3O14543 225 aa13.23□□□□□ -0.29
MSH6-206ENST00000455383 OR5AC1P0C628 307 aa13.23□□□□□ -0.29
MSH6-206ENST00000455383 NCS1P62166 190 aa13.23□□□□□ -0.29
MSH6-206ENST00000455383 ZNF79Q15937 498 aa13.23□□□□□ -0.29
MSH6-206ENST00000455383 SELENOHQ8IZQ5 122 aaKnown RBP13.23□□□□□ -0.29
MSH6-206ENST00000455383 OR51G1Q8NGK1 321 aa13.23□□□□□ -0.29
MSH6-206ENST00000455383 MARCH1Q8TCQ1 289 aa13.23□□□□□ -0.29
MSH6-206ENST00000455383 RBPMSQ93062 196 aaKnown RBP13.23□□□□□ -0.29
MSH6-206ENST00000455383 TEX13DA0A0J9YY54 714 aaPredicted RBP13.22□□□□□ -0.29
MSH6-206ENST00000455383 IGKV3-20P01619 116 aa13.22□□□□□ -0.29
MSH6-206ENST00000455383 NUP62P37198 522 aaPredicted RBP13.22□□□□□ -0.29
MSH6-206ENST00000455383 NMSQ5H8A3 153 aa13.22□□□□□ -0.29
MSH6-206ENST00000455383 OR8G2PQ6IF36 304 aa13.22□□□□□ -0.29
MSH6-206ENST00000455383 C1orf158Q8N1D5 194 aa13.22□□□□□ -0.29
MSH6-206ENST00000455383 TMEM229BQ8NBD8 167 aa13.22□□□□□ -0.29
MSH6-206ENST00000455383 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
MSH6-206ENST00000455383 ACY3Q96HD9 319 aa13.22□□□□□ -0.29
MSH6-206ENST00000455383 RTBDNQ9BSG5 229 aaPredicted RBP13.22□□□□□ -0.29
MSH6-206ENST00000455383 DNAH5Q8TE73 4624 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 CEBPZOSA8MTT3 80 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 PSMB3P49720 205 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 PAX9P55771 341 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 FAM3BP58499 235 aaPredicted RBP13.21□□□□□ -0.29
MSH6-206ENST00000455383 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 TMEM88Q6PEY1 159 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 NOXA1Q86UR1 476 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 LINC00052Q96N35 136 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 SLC35B3Q9H1N7 401 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 NAA60Q9H7X0 242 aa13.21□□□□□ -0.29
MSH6-206ENST00000455383 YTHDF2Q9Y5A9 579 aaKnown RBP13.21□□□□□ -0.29
MSH6-206ENST00000455383 CDK2AP2O75956 126 aa13.2□□□□□ -0.3
MSH6-206ENST00000455383 ID1P41134 155 aa13.2□□□□□ -0.3
MSH6-206ENST00000455383 VBP1P61758 197 aa13.2□□□□□ -0.3
MSH6-206ENST00000455383 SCGB2B2Q4G0G5 96 aa13.2□□□□□ -0.3
MSH6-206ENST00000455383 CACFD1Q9UGQ2 172 aa13.2□□□□□ -0.3
MSH6-206ENST00000455383 GOLT1BQ9Y3E0 138 aa13.2□□□□□ -0.3
MSH6-206ENST00000455383 A0A087WXM4 84 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 LOC102723971A0A1B0GUV8 181 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 FAM25AB3EWG3 89 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 FAM25CB3EWG5 89 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 FAM25GB3EWG6 89 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 RAB3DO95716 219 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 HBE1P02100 147 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 HTN3P15516 51 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 RORCP51449 518 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 TAS2R19P59542 299 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 PSG9Q00887 426 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 MEF2DQ14814 521 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 C1orf194Q5T5A4 169 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 OR4B1Q8NGF8 309 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 FUNDC2Q9BWH2 189 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 VCX3AQ9NNX9 186 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 PFDN2Q9UHV9 154 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 TMEM56-RWDD3S4R434 201 aa13.19□□□□□ -0.3
MSH6-206ENST00000455383 IGKV1D-37A0A075B6S9 117 aa13.18□□□□□ -0.3
MSH6-206ENST00000455383 A8MTW9 85 aa13.18□□□□□ -0.3
MSH6-206ENST00000455383 SUPT4H1P63272 117 aaKnown RBP13.18□□□□□ -0.3
MSH6-206ENST00000455383 TNP2Q05952 138 aa13.18□□□□□ -0.3
MSH6-206ENST00000455383 KLF9Q13886 244 aaPredicted RBP13.18□□□□□ -0.3
MSH6-206ENST00000455383 SURF2Q15527 256 aaPredicted RBP13.18□□□□□ -0.3
MSH6-206ENST00000455383 TMEM268Q5VZI3 342 aa13.18□□□□□ -0.3
MSH6-206ENST00000455383 STEAP1BQ6NZ63 245 aa13.18□□□□□ -0.3
MSH6-206ENST00000455383 MZT2AQ6P582 158 aa13.18□□□□□ -0.3
MSH6-206ENST00000455383 C15orf53Q8NAA6 179 aa13.18□□□□□ -0.3
MSH6-206ENST00000455383 EXTL2Q9UBQ6 330 aa13.18□□□□□ -0.3
MSH6-206ENST00000455383 C14orf166Q9Y224 244 aaKnown RBP13.18□□□□□ -0.3
MSH6-206ENST00000455383 U3KQ87 197 aa13.18□□□□□ -0.3
MSH6-206ENST00000455383 A0A0J9YX75 114 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 CRYM-AS1A6NIL9 109 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 F6UB75 175 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 ISLRO14498 428 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 TNFAIP8O95379 198 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 ZNF90Q03938 601 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 RRN3P1Q2M238 152 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 FAM78BQ5VT40 261 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 COQ8AQ8NI60 647 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 PBDC1Q9BVG4 233 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 GPR132Q9UNW8 380 aa13.17□□□□□ -0.3
MSH6-206ENST00000455383 C16orf90A8MZG2 172 aa13.16□□□□□ -0.3
MSH6-206ENST00000455383 ALDH3B2P48448 385 aa13.16□□□□□ -0.3
MSH6-206ENST00000455383 DAD1P61803 113 aa13.16□□□□□ -0.3
MSH6-206ENST00000455383 GPR107Q5VW38 600 aa13.16□□□□□ -0.3
MSH6-206ENST00000455383 C15orf40Q8WUR7 153 aa13.16□□□□□ -0.3
MSH6-206ENST00000455383 IL22RA2Q969J5 263 aa13.16□□□□□ -0.3
MSH6-206ENST00000455383 C7orf50Q9BRJ6 194 aaKnown RBP13.16□□□□□ -0.3
MSH6-206ENST00000455383 HSPB7Q9UBY9 170 aa13.16□□□□□ -0.3
MSH6-206ENST00000455383 SULT1A3P0DMM9 295 aa13.15□□□□□ -0.3
MSH6-206ENST00000455383 SULT1A4P0DMN0 295 aa13.15□□□□□ -0.3
MSH6-206ENST00000455383 GPX4P36969 197 aaPredicted RBP13.15□□□□□ -0.3
MSH6-206ENST00000455383 SSBP1Q04837 148 aaKnown RBP13.15□□□□□ -0.3
MSH6-206ENST00000455383 GAMTQ14353 236 aa13.15□□□□□ -0.3
MSH6-206ENST00000455383 EBLN2Q6P2I7 272 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms