RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 SMLR1H3BR10 107 aa9.04□□□□□ -0.96
LINC00339-205ENST00000452322 WIPF1O43516 503 aa9.04□□□□□ -0.96
LINC00339-205ENST00000452322 SAP30O75446 220 aa9.04□□□□□ -0.96
LINC00339-205ENST00000452322 CFDP00746 253 aaPredicted RBP9.04□□□□□ -0.96
LINC00339-205ENST00000452322 IL4P05112 153 aa9.04□□□□□ -0.96
LINC00339-205ENST00000452322 CSN3P07498 182 aa9.04□□□□□ -0.96
LINC00339-205ENST00000452322 CLINT1Q14677 625 aa9.04□□□□□ -0.96
LINC00339-205ENST00000452322 TM4SF20Q53R12 229 aa9.04□□□□□ -0.96
LINC00339-205ENST00000452322 TCTE3Q8IZS6 198 aa9.04□□□□□ -0.96
LINC00339-205ENST00000452322 INO80EQ8NBZ0 244 aaPredicted RBP9.04□□□□□ -0.96
LINC00339-205ENST00000452322 ATP5SQ99766 215 aa9.04□□□□□ -0.96
LINC00339-205ENST00000452322 MRPL27Q9P0M9 148 aaKnown RBP9.04□□□□□ -0.96
LINC00339-205ENST00000452322 IGHV3OR16-8A0A075B7F1 116 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 WI2-2373I1.2A0A1W2PRP0 233 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 RNF222A6NCQ9 220 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 MPDU1O75352 247 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 DFFBO76075 338 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 C8orf88P0DMB2 117 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 FOLR2P14207 255 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 CBLN1P23435 193 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 SELENOTP62341 195 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 RAB31Q13636 194 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 CYP2G1PQ6ZSU1 146 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 AKAP14Q86UN6 197 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 BPIFCQ8NFQ6 507 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 RNF125Q96EQ8 232 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 MGST2Q99735 147 aa9.03□□□□□ -0.96
LINC00339-205ENST00000452322 DNAH3Q8TD57 4116 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 AGPAT2O15120 278 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 ARPC5O15511 151 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 ZNF207O43670 478 aaKnown RBP9.02□□□□□ -0.97
LINC00339-205ENST00000452322 EDN2P20800 178 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 CAMLGP49069 296 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 OR2F1Q13607 317 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 USF2Q15853 346 aaPredicted RBP9.02□□□□□ -0.97
LINC00339-205ENST00000452322 OXLD1Q5BKU9 147 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 BTNL8Q6UX41 500 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 ADAMTSL5Q6ZMM2 481 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 METTL26Q96S19 204 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 SMIM3Q9BZL3 60 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 FBXL17Q9UF56 701 aa9.02□□□□□ -0.97
LINC00339-205ENST00000452322 IGHV7-4-1A0A0J9YVY3 117 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 HMSDA8MTL9 139 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 G3V4G9 280 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 IGLV1-51P01701 117 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 FGF7P21781 194 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 NPPCP23582 126 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 GATA2P23769 480 aaPredicted RBP9.01□□□□□ -0.97
LINC00339-205ENST00000452322 CRYBB3P26998 211 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 BMI1P35226 326 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 TMEM182Q6ZP80 229 aaPredicted RBP9.01□□□□□ -0.97
LINC00339-205ENST00000452322 OR11H4Q8NGC9 324 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 DYNLRB2Q8TF09 96 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 GGTLC1Q9BX51 225 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 WDR61Q9GZS3 305 aaKnown RBP9.01□□□□□ -0.97
LINC00339-205ENST00000452322 TECRQ9NZ01 308 aaKnown RBP9.01□□□□□ -0.97
LINC00339-205ENST00000452322 SMPXQ9UHP9 88 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 RABAC1Q9UI14 185 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 SLC45A2Q9UMX9 530 aa9.01□□□□□ -0.97
LINC00339-205ENST00000452322 IFNA5P01569 189 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 HNRNPCP07910 306 aaKnown RBP eCLIP9□□□□□ -0.97
LINC00339-205ENST00000452322 LINC00869P0C866 280 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 PLP1P60201 277 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 LYZP61626 148 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 ZNF266Q14584 549 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 ZNF345Q14585 488 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 OPCMLQ14982 345 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 OR2K2Q8NGT1 345 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 NARS2Q96I59 477 aaKnown RBP9□□□□□ -0.97
LINC00339-205ENST00000452322 PBDC1Q9BVG4 233 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 NPCDR1Q9BY65 106 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 PARD6GQ9BYG4 376 aaPredicted RBP9□□□□□ -0.97
LINC00339-205ENST00000452322 MFFQ9GZY8 342 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 VSIRQ9H7M9 311 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 WFDC1Q9HC57 220 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 MLXQ9UH92 298 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 NBEAL1Q6ZS30 2694 aa9□□□□□ -0.97
LINC00339-205ENST00000452322 A0A1W2PS18 150 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 CHEK1O14757 476 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 C1QBP02746 253 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 RPL29P47914 159 aaKnown RBP8.99□□□□□ -0.97
LINC00339-205ENST00000452322 EIF2B2P49770 351 aaKnown RBP8.99□□□□□ -0.97
LINC00339-205ENST00000452322 AP2S1P53680 142 aaPredicted RBP8.99□□□□□ -0.97
LINC00339-205ENST00000452322 PRR20EP86478 221 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 PRR20CP86479 221 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 PRR20DP86480 221 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 PRR20BP86481 221 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 PRR20AP86496 221 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 EGFEM1PQ0D2K5 195 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 DEFB114Q30KQ6 69 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 PXDC1Q5TGL8 231 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 STPG3Q8N7X2 389 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 RHPN1-AS1Q9BWJ2 59 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 TMEM231Q9H6L2 316 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 KCNIP2Q9NS61 270 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 ZMAT5Q9UDW3 170 aaKnown RBP8.99□□□□□ -0.97
LINC00339-205ENST00000452322 PFDN2Q9UHV9 154 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 U3KQE9 123 aa8.99□□□□□ -0.97
LINC00339-205ENST00000452322 IGHV3-49A0A0A0MS15 119 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms