RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TMEM190Q8WZ59 177 aa8.85□□□□□ -0.99
SCN9A-204ENST00000452182 HYLS1Q96M11 299 aa8.85□□□□□ -0.99
SCN9A-204ENST00000452182 MFFQ9GZY8 342 aa8.85□□□□□ -0.99
SCN9A-204ENST00000452182 UBE2L5PA0A1B0GUS4 154 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 K7EMT4 169 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 OVOL1O14753 267 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
SCN9A-204ENST00000452182 RD3LP0DJH9 198 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 SYNJ2BPP57105 145 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 SELENOTP62341 195 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 ZNF90Q03938 601 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 CD300CQ08708 224 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 RAB31Q13636 194 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 TOMM20LQ6UXN7 152 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 UNQ9165/PRO28630Q6UXU0 137 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 OR9G4Q8NGQ1 327 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
SCN9A-204ENST00000452182 PEMTQ9UBM1 199 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 FBXL17Q9UF56 701 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 PUS1Q9Y606 427 aaKnown RBP eCLIP8.84□□□□□ -0.99
SCN9A-204ENST00000452182 DNHD1Q96M86 4753 aa8.84□□□□□ -0.99
SCN9A-204ENST00000452182 IGHV3-35A0A0C4DH35 117 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 TAAR5O14804 337 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 AGPAT2O15120 278 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 PSG1P11464 419 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 AP2S1P53680 142 aaPredicted RBP8.83□□□□□ -1
SCN9A-204ENST00000452182 ZNF266Q14584 549 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 BTNL8Q6UX41 500 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 CYP2G1PQ6ZSU1 146 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 KCNRGQ8N5I3 272 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 OR51G1Q8NGK1 321 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 RCC1LQ96I51 464 aaKnown RBP8.83□□□□□ -1
SCN9A-204ENST00000452182 MGST2Q99735 147 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 SMIM3Q9BZL3 60 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 WDR61Q9GZS3 305 aaKnown RBP8.83□□□□□ -1
SCN9A-204ENST00000452182 DAZ1Q9NQZ3 744 aaKnown RBP8.83□□□□□ -1
SCN9A-204ENST00000452182 UFC1Q9Y3C8 167 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 A0A0D9SG52 128 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 WI2-2373I1.2A0A1W2PRP0 233 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 ZNF320A2RRD8 509 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 YIF1AO95070 293 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 CAMLGP49069 296 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 BPIFCQ8NFQ6 507 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 GINS3Q9BRX5 216 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 WFDC1Q9HC57 220 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 SIGLEC8Q9NYZ4 499 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 SLC45A2Q9UMX9 530 aa8.83□□□□□ -1
SCN9A-204ENST00000452182 WNK1Q9H4A3 2382 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 TMEM213A2RRL7 107 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 IFNA5P01569 189 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 IL4P05112 153 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 FGF7P21781 194 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 PLP1P60201 277 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 ZFP69Q49AA0 526 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 IL34Q6ZMJ4 242 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 MARC2Q969Z3 335 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 RNF125Q96EQ8 232 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 MCRIP2Q9BUT9 160 aaKnown RBP8.82□□□□□ -1
SCN9A-204ENST00000452182 ELOVL1Q9BW60 279 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 GGTLC1Q9BX51 225 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 NPCDR1Q9BY65 106 aa8.82□□□□□ -1
SCN9A-204ENST00000452182 C2orf70A6NJV1 201 aa8.81□□□□□ -1
SCN9A-204ENST00000452182 C8orf88P0DMB2 117 aa8.81□□□□□ -1
SCN9A-204ENST00000452182 ATF4P18848 351 aaPredicted RBP8.81□□□□□ -1
SCN9A-204ENST00000452182 CXCL2P19875 107 aa8.81□□□□□ -1
SCN9A-204ENST00000452182 RPL29P47914 159 aaKnown RBP8.81□□□□□ -1
SCN9A-204ENST00000452182 OPCMLQ14982 345 aa8.81□□□□□ -1
SCN9A-204ENST00000452182 PXDC1Q5TGL8 231 aa8.81□□□□□ -1
SCN9A-204ENST00000452182 TMEM182Q6ZP80 229 aaPredicted RBP8.81□□□□□ -1
SCN9A-204ENST00000452182 C20orf24Q9BUV8 137 aa8.81□□□□□ -1
SCN9A-204ENST00000452182 MRPL27Q9P0M9 148 aaKnown RBP8.81□□□□□ -1
SCN9A-204ENST00000452182 PFDN1O60925 122 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 JTBO76095 146 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 CSN3P07498 182 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 CBLN1P23435 193 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 GATA2P23769 480 aaPredicted RBP8.8□□□□□ -1
SCN9A-204ENST00000452182 CRYBB3P26998 211 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 EIF2B2P49770 351 aaKnown RBP8.8□□□□□ -1
SCN9A-204ENST00000452182 INSL3P51460 131 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 USF2Q15853 346 aaPredicted RBP8.8□□□□□ -1
SCN9A-204ENST00000452182 TM4SF20Q53R12 229 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 SCGB1C1Q8TD33 95 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 KCNIP2Q9NS61 270 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 PKD1L1Q8TDX9 2849 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 CMYA5Q8N3K9 4069 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 BORCS7-ASMTA0A0B4J1R7 106 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 C17orf112F2Z3M2 114 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 WIPF1O43516 503 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 LINC00869P0C866 280 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 FOLR2P14207 255 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 NPPCP23582 126 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 LGALSLQ3ZCW2 172 aaPredicted RBP8.8□□□□□ -1
SCN9A-204ENST00000452182 STPG3Q8N7X2 389 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 ZNF709Q8N972 641 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 METTL26Q96S19 204 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 ARPC5LQ9BPX5 153 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 ARL6Q9H0F7 186 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 CYTL1Q9NRR1 136 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 TIMM9Q9Y5J7 89 aa8.8□□□□□ -1
SCN9A-204ENST00000452182 U3KQE9 123 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms