RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 SLC35E1Q96K37 410 aa12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 C11orf68Q9H3H3 251 aaKnown RBP12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 TMED3Q9Y3Q3 217 aa12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 FAM90A26D6RGX4 464 aa12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 BUB3O43684 328 aa12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 INPP1P49441 399 aa12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 SNRPD3P62318 126 aaKnown RBP12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 RPP30P78346 268 aaKnown RBP12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 GAMTQ14353 236 aa12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 ACTL10Q5JWF8 245 aa12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 TRPT1Q86TN4 253 aaKnown RBP12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 CENPSQ8N2Z9 138 aa12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 RNF125Q96EQ8 232 aa12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 CIB3Q96Q77 187 aaPredicted RBP12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 MFFQ9GZY8 342 aa12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 RBM38Q9H0Z9 239 aaKnown RBP12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 SEPSECSQ9HD40 501 aaKnown RBP12.69□□□□□ -0.38
CLTCL1-203ENST00000449918 KNCNA6PVL3 124 aa12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 PPP1R1AQ13522 171 aa12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 PSMG4Q5JS54 123 aa12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 OR8G2PQ6IF36 304 aa12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 SIGLEC15Q6ZMC9 328 aa12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 PHLDA1Q8WV24 401 aaPredicted RBP12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 LINC00476Q8WZB0 136 aa12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 RAB40CQ96S21 281 aa12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 NRN1Q9NPD7 142 aa12.68□□□□□ -0.38
CLTCL1-203ENST00000449918 SNRPGP15A8MWD9 76 aa12.67□□□□□ -0.38
CLTCL1-203ENST00000449918 LY6G6CO95867 125 aa12.67□□□□□ -0.38
CLTCL1-203ENST00000449918 IAPPP10997 89 aa12.67□□□□□ -0.38
CLTCL1-203ENST00000449918 UBE2MP61081 183 aaKnown RBP12.67□□□□□ -0.38
CLTCL1-203ENST00000449918 PBDC1Q9BVG4 233 aa12.67□□□□□ -0.38
CLTCL1-203ENST00000449918 SRRQ9GZT4 340 aa12.67□□□□□ -0.38
CLTCL1-203ENST00000449918 PAIP2BQ9ULR5 123 aaKnown RBP12.67□□□□□ -0.38
CLTCL1-203ENST00000449918 NAP1L6A6NFF2 107 aa12.66□□□□□ -0.38
CLTCL1-203ENST00000449918 ZNF90Q03938 601 aa12.66□□□□□ -0.38
CLTCL1-203ENST00000449918 TRIQKQ629K1 86 aa12.66□□□□□ -0.38
CLTCL1-203ENST00000449918 IGKV1D-37A0A075B6S9 117 aa12.65□□□□□ -0.38
CLTCL1-203ENST00000449918 SYNGR2O43760 224 aa12.65□□□□□ -0.38
CLTCL1-203ENST00000449918 HOXB5P09067 269 aa12.65□□□□□ -0.38
CLTCL1-203ENST00000449918 GIG44P09565 113 aaPredicted RBP12.65□□□□□ -0.38
CLTCL1-203ENST00000449918 NUTF2P61970 127 aaKnown RBP12.65□□□□□ -0.38
CLTCL1-203ENST00000449918 TRGV9Q99603 122 aa12.65□□□□□ -0.38
CLTCL1-203ENST00000449918 FBXL17Q9UF56 701 aa12.65□□□□□ -0.38
CLTCL1-203ENST00000449918 DNAH1Q9P2D7 4330 aa12.65□□□□□ -0.38
CLTCL1-203ENST00000449918 DEFB4AO15263 64 aa12.64□□□□□ -0.39
CLTCL1-203ENST00000449918 NANOS2P60321 138 aaKnown RBP12.64□□□□□ -0.39
CLTCL1-203ENST00000449918 C1orf194Q5T5A4 169 aa12.64□□□□□ -0.39
CLTCL1-203ENST00000449918 GGNBP1Q5YKI7 109 aa12.64□□□□□ -0.39
CLTCL1-203ENST00000449918 MAGT1Q9H0U3 335 aa12.64□□□□□ -0.39
CLTCL1-203ENST00000449918 C9orf170A2RU37 121 aa12.63□□□□□ -0.39
CLTCL1-203ENST00000449918 WRBO00258 174 aa12.63□□□□□ -0.39
CLTCL1-203ENST00000449918 NDUFB6O95139 128 aa12.63□□□□□ -0.39
CLTCL1-203ENST00000449918 CFDP00746 253 aaPredicted RBP12.63□□□□□ -0.39
CLTCL1-203ENST00000449918 MIFP14174 115 aa12.63□□□□□ -0.39
CLTCL1-203ENST00000449918 LYZP61626 148 aa12.63□□□□□ -0.39
CLTCL1-203ENST00000449918 BAK1Q16611 211 aa12.63□□□□□ -0.39
CLTCL1-203ENST00000449918 COQ8AQ8NI60 647 aa12.63□□□□□ -0.39
CLTCL1-203ENST00000449918 PPP1R14BQ96C90 147 aa12.63□□□□□ -0.39
CLTCL1-203ENST00000449918 CENPXA8MT69 81 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 IFNA21P01568 189 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 C4BPBP20851 252 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 ID1P41134 155 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 NKX2-1P43699 371 aaPredicted RBP12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 OR2F1Q13607 317 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 SPANXN5Q5MJ07 72 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 THAP8Q8NA92 274 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 Q8NAQ8 132 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 C1QTNF4Q9BXJ3 329 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 HRH4Q9H3N8 390 aa12.62□□□□□ -0.39
CLTCL1-203ENST00000449918 ZNF705EA8MWA4 302 aaPredicted RBP12.61□□□□□ -0.39
CLTCL1-203ENST00000449918 H3BMM0 161 aa12.61□□□□□ -0.39
CLTCL1-203ENST00000449918 OR8I2Q8N0Y5 310 aa12.61□□□□□ -0.39
CLTCL1-203ENST00000449918 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
CLTCL1-203ENST00000449918 STRAPQ9Y3F4 350 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-203ENST00000449918 IGKV1OR2-108A0A075B7D4 117 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 IGHV4-28A0A0C4DH34 117 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 S100A7P31151 101 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 ID3Q02535 119 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 SAMD13Q5VXD3 122 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 CSNK1G2-AS1Q8NCQ2 148 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 C2CD4CQ8TF44 421 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 LINC00052Q96N35 136 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 C7orf50Q9BRJ6 194 aaKnown RBP12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 CLEC5AQ9NY25 188 aa12.6□□□□□ -0.39
CLTCL1-203ENST00000449918 C11orf94C9JXX5 98 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 ADAP1O75689 374 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 OR4E1P0C645 316 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 PSMB3P49720 205 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 C4orf46Q504U0 113 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 SLC45A2Q9UMX9 530 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 FLVCR2Q9UPI3 526 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 X6R8D5 127 aa12.59□□□□□ -0.39
CLTCL1-203ENST00000449918 HYDINQ4G0P3 5121 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms