RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 YIF1AO95070 293 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 TSPAN15O95858 294 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 TOMM40O96008 361 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 RPL29P47914 159 aaKnown RBP11.27□□□□□ -0.6
TNF-208ENST00000449264 LYZP61626 148 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 SELENOTP62341 195 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 FAM209BQ5JX69 171 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 FAM74A1Q5RGS3 127 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 PBDC1Q9BVG4 233 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 SLC39A9Q9NUM3 307 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 DOK5Q9P104 306 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 PUS1Q9Y606 427 aaKnown RBP eCLIP11.27□□□□□ -0.6
TNF-208ENST00000449264 OR2C1O95371 312 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 IL4P05112 153 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 SEC11BP0C7V7 166 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 YPEL3P61236 119 aaPredicted RBP11.27□□□□□ -0.61
TNF-208ENST00000449264 PRR20EP86478 221 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 PRR20CP86479 221 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 PRR20DP86480 221 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 PRR20BP86481 221 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 PRR20AP86496 221 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 RELQ04864 619 aaPredicted RBP11.27□□□□□ -0.61
TNF-208ENST00000449264 NSUN5P1Q3KNT7 163 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 GCSAMLQ5JQS6 135 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 EIF5AL1Q6IS14 154 aaKnown RBP11.27□□□□□ -0.61
TNF-208ENST00000449264 ZNF600Q6ZNG1 722 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 LURAP1LQ8IV03 231 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 OR51G1Q8NGK1 321 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 DUX3Q96PT4 197 aa11.27□□□□□ -0.61
TNF-208ENST00000449264 COL6A5A8TX70 2615 aa11.26□□□□□ -0.61
TNF-208ENST00000449264 GGCTO75223 188 aaKnown RBP11.26□□□□□ -0.61
TNF-208ENST00000449264 TEX261Q6UWH6 196 aa11.26□□□□□ -0.61
TNF-208ENST00000449264 Q6ZRG5 221 aa11.26□□□□□ -0.61
TNF-208ENST00000449264 Q8WTZ3 238 aa11.26□□□□□ -0.61
TNF-208ENST00000449264 VSIRQ9H7M9 311 aa11.26□□□□□ -0.61
TNF-208ENST00000449264 ORM2P19652 201 aa11.25□□□□□ -0.61
TNF-208ENST00000449264 RAB2AP61019 212 aa11.25□□□□□ -0.61
TNF-208ENST00000449264 RPEL1Q2QD12 228 aa11.25□□□□□ -0.61
TNF-208ENST00000449264 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
TNF-208ENST00000449264 OR11H1Q8NG94 326 aa11.25□□□□□ -0.61
TNF-208ENST00000449264 OR1B1Q8NGR6 318 aa11.25□□□□□ -0.61
TNF-208ENST00000449264 PHYHIPLQ96FC7 376 aa11.25□□□□□ -0.61
TNF-208ENST00000449264 RCC1LQ96I51 464 aaKnown RBP11.25□□□□□ -0.61
TNF-208ENST00000449264 STAB1Q9NY15 2570 aa11.25□□□□□ -0.61
TNF-208ENST00000449264 COX7A2P2O60397 106 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 HSPB1P04792 205 aaKnown RBP11.24□□□□□ -0.61
TNF-208ENST00000449264 SERF2P84101 59 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 TOMM20LQ6UXN7 152 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 TMEM158Q8WZ71 300 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 DPF1Q92782 380 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 RNF125Q96EQ8 232 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 ZNF414Q96IQ9 312 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 C20orf24Q9BUV8 137 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 LINC01619G3V211 115 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 IFNA7P01567 189 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 OR5G3P0C626 314 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 HOXD3P31249 432 aaPredicted RBP11.24□□□□□ -0.61
TNF-208ENST00000449264 IFITM2Q01629 132 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 USF2Q15853 346 aaPredicted RBP11.24□□□□□ -0.61
TNF-208ENST00000449264 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
TNF-208ENST00000449264 OR1N2Q8NGR9 330 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 ZFAND3Q9H8U3 227 aa11.24□□□□□ -0.61
TNF-208ENST00000449264 ZNF320A2RRD8 509 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 NDUFA4O00483 81 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 ZNF207O43670 478 aaKnown RBP11.23□□□□□ -0.61
TNF-208ENST00000449264 M6PRP20645 277 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 SLURP1P55000 103 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 TMEM41BQ5BJD5 291 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 UNQ9165/PRO28630Q6UXU0 137 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 NDUFA11Q86Y39 141 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 OR10G4Q8NGN3 311 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 OR10G9Q8NGN4 311 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 OR10G7Q8NGN6 311 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 RAX2Q96IS3 184 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 UHRF2Q96PU4 802 aa11.23□□□□□ -0.61
TNF-208ENST00000449264 WI2-2373I1.2A0A1W2PRP0 233 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 HYPMO75409 117 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 EIF3GO75821 320 aaKnown RBP eCLIP11.22□□□□□ -0.61
TNF-208ENST00000449264 MBP02144 154 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 ZP3P21754 424 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 FHITP49789 147 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 FAM122CQ6P4D5 195 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 OR1L4Q8NGR5 311 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 FAM213BQ8TBF2 198 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 PFDN5Q99471 154 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 SLC25A22Q9H936 323 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 RPRMQ9NS64 109 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 UBQLN2Q9UHD9 624 aa11.22□□□□□ -0.61
TNF-208ENST00000449264 UMAD1C9J7I0 102 aa11.21□□□□□ -0.61
TNF-208ENST00000449264 SYNJ2BPP57105 145 aa11.21□□□□□ -0.61
TNF-208ENST00000449264 FAM106AQ4KMX7 169 aa11.21□□□□□ -0.61
TNF-208ENST00000449264 C10orf113Q5VZT2 155 aa11.21□□□□□ -0.61
TNF-208ENST00000449264 TMEM190Q8WZ59 177 aa11.21□□□□□ -0.61
TNF-208ENST00000449264 CITED1Q99966 193 aa11.21□□□□□ -0.61
TNF-208ENST00000449264 HIGD1AQ9Y241 93 aa11.21□□□□□ -0.61
TNF-208ENST00000449264 CCL24O00175 119 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms