RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 STRAPQ9Y3F4 350 aaKnown RBP10.91□□□□□ -0.66
USP39-206ENST00000448971 C5orf51A6NDU8 294 aa10.9□□□□□ -0.66
USP39-206ENST00000448971 A8MZ25 164 aa10.9□□□□□ -0.66
USP39-206ENST00000448971 IL4P05112 153 aa10.9□□□□□ -0.66
USP39-206ENST00000448971 NPPCP23582 126 aa10.9□□□□□ -0.66
USP39-206ENST00000448971 TFPI2P48307 235 aa10.9□□□□□ -0.66
USP39-206ENST00000448971 YPEL3P61236 119 aaPredicted RBP10.9□□□□□ -0.66
USP39-206ENST00000448971 IFITM3Q01628 133 aa10.9□□□□□ -0.66
USP39-206ENST00000448971 ID3Q02535 119 aa10.9□□□□□ -0.66
USP39-206ENST00000448971 C19orf73Q9NVV2 129 aa10.9□□□□□ -0.66
USP39-206ENST00000448971 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
USP39-206ENST00000448971 A0A1W2PS18 150 aa10.89□□□□□ -0.67
USP39-206ENST00000448971 TOMM40O96008 361 aa10.89□□□□□ -0.67
USP39-206ENST00000448971 APOHP02749 345 aaPredicted RBP10.89□□□□□ -0.67
USP39-206ENST00000448971 GPX4P36969 197 aaPredicted RBP10.89□□□□□ -0.67
USP39-206ENST00000448971 RPL11P62913 178 aaKnown RBP10.89□□□□□ -0.67
USP39-206ENST00000448971 AKR1C1Q04828 323 aa10.89□□□□□ -0.67
USP39-206ENST00000448971 GAMTQ14353 236 aa10.89□□□□□ -0.67
USP39-206ENST00000448971 TCF24Q7RTU0 167 aa10.89□□□□□ -0.67
USP39-206ENST00000448971 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
USP39-206ENST00000448971 GPN1Q9HCN4 374 aaPredicted RBP10.89□□□□□ -0.67
USP39-206ENST00000448971 UBQLN2Q9UHD9 624 aa10.89□□□□□ -0.67
USP39-206ENST00000448971 FABP1P07148 127 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 RD3LP0DJH9 198 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 ZFAND6Q6FIF0 208 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 ACOT7LQ6ZUV0 252 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 NRARPQ7Z6K4 114 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 GRAMD2BQ96HH9 432 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 TM2D3Q9BRN9 247 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 PBDC1Q9BVG4 233 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 VSIRQ9H7M9 311 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 EDA2RQ9HAV5 297 aa10.88□□□□□ -0.67
USP39-206ENST00000448971 LSM5Q9Y4Y9 91 aaKnown RBP10.88□□□□□ -0.67
USP39-206ENST00000448971 SMCO3A2RU48 225 aa10.87□□□□□ -0.67
USP39-206ENST00000448971 CD5P06127 495 aa10.87□□□□□ -0.67
USP39-206ENST00000448971 HNRNPCP07910 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
USP39-206ENST00000448971 PAFAH1B2P68402 229 aa10.87□□□□□ -0.67
USP39-206ENST00000448971 USF2Q15853 346 aaPredicted RBP10.87□□□□□ -0.67
USP39-206ENST00000448971 OR8G2PQ6IF36 304 aa10.87□□□□□ -0.67
USP39-206ENST00000448971 GSG1LQ6UXU4 331 aa10.87□□□□□ -0.67
USP39-206ENST00000448971 GBGT1Q8N5D6 347 aa10.87□□□□□ -0.67
USP39-206ENST00000448971 OR51G1Q8NGK1 321 aa10.87□□□□□ -0.67
USP39-206ENST00000448971 RNF125Q96EQ8 232 aa10.87□□□□□ -0.67
USP39-206ENST00000448971 RAB40CQ96S21 281 aa10.87□□□□□ -0.67
USP39-206ENST00000448971 RCL1Q9Y2P8 373 aaKnown RBP10.87□□□□□ -0.67
USP39-206ENST00000448971 PRSS46E5RG02 174 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 L7N2F9 121 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 DNASE2O00115 360 aaPredicted RBP10.86□□□□□ -0.67
USP39-206ENST00000448971 DFFBO76075 338 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 MBPP02686 304 aaPredicted RBP10.86□□□□□ -0.67
USP39-206ENST00000448971 IL5P05113 134 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 PSG1P11464 419 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 CRYBB3P26998 211 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 P2RY1P47900 373 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 S100A10P60903 97 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 LYZP61626 148 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 VAMP2P63027 116 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 WFDC3Q8IUB2 231 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 SPATA25Q9BR10 227 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 RABAC1Q9UI14 185 aa10.86□□□□□ -0.67
USP39-206ENST00000448971 IGKV1D-37A0A075B6S9 117 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 INMT-MINDY4F8WBC2 141 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 PRAF2O60831 178 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 TSC22D2O75157 780 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 METTL15P1P0C7V9 234 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 EIF2B2P49770 351 aaKnown RBP10.85□□□□□ -0.67
USP39-206ENST00000448971 ZNF90Q03938 601 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 OR2F1Q13607 317 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 HAGHQ16775 308 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 ODF3L2Q3SX64 289 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 FAM90A2PQ658T7 463 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 STXBP6Q8NFX7 210 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 SMIM8Q96KF7 97 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 C2orf50Q96LR7 162 aa10.85□□□□□ -0.67
USP39-206ENST00000448971 K7EPK0 472 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 GOSR2O14653 212 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 CCNKO75909 580 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 PVALBP20472 110 aaPredicted RBP10.84□□□□□ -0.67
USP39-206ENST00000448971 NUP62P37198 522 aaPredicted RBP10.84□□□□□ -0.67
USP39-206ENST00000448971 BCAP31P51572 246 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 TAS2R30P59541 319 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 RRAS2P62070 204 aaPredicted RBP10.84□□□□□ -0.67
USP39-206ENST00000448971 LILRB2Q8N423 598 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 THAP8Q8NA92 274 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 OR10P1Q8NGE3 313 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 TRGV9Q99603 122 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 GGTLC1Q9BX51 225 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 MGAT4CQ9UBM8 478 aa10.84□□□□□ -0.67
USP39-206ENST00000448971 PLECQ15149 4684 aaKnown RBP10.84□□□□□ -0.67
USP39-206ENST00000448971 LOC102724200A0A096LPH7 203 aaPredicted RBP10.83□□□□□ -0.68
USP39-206ENST00000448971 C7orf66A4D0T2 115 aa10.83□□□□□ -0.68
USP39-206ENST00000448971 RBMY1BA6NDE4 496 aaKnown RBP10.83□□□□□ -0.68
USP39-206ENST00000448971 RBMY1EA6NEQ0 496 aaKnown RBP10.83□□□□□ -0.68
USP39-206ENST00000448971 HELTA6NFD8 242 aa10.83□□□□□ -0.68
USP39-206ENST00000448971 RBMY1DP0C7P1 496 aaKnown RBP10.83□□□□□ -0.68
USP39-206ENST00000448971 CAV2P51636 162 aa10.83□□□□□ -0.68
USP39-206ENST00000448971 PAX9P55771 341 aa10.83□□□□□ -0.68
USP39-206ENST00000448971 TMEM14EPQ6UXP3 125 aa10.83□□□□□ -0.68
USP39-206ENST00000448971 PPP1R14BQ96C90 147 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms