RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TNFRSF18Q9Y5U5 241 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 TRBV7-1A0A0A6YYK4 115 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 TRBV5-5A0A0J9YX44 114 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 PRSS47A8MTI9 375 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 KRBOX1C9JBD0 128 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 M0R143 59 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 CACNG7P62955 275 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 XAF1Q6GPH4 301 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 SPSB3Q6PJ21 355 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 LAX1Q8IWV1 398 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 ACTR3CQ9C0K3 210 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 LYPD3O95274 346 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR5AC1P0C628 307 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 SLC38A11Q08AI6 406 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 STPG2Q8N412 459 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGKV2D-24A0A075B6R9 120 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 PRB4P10163 310 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 M6PRP20645 277 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 AKR1C3P42330 323 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 GVQW1Q8N7I0 195 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 FAM223BA6NKX1 122 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 ASAH1Q13510 395 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 CDSNQ15517 529 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 BAK1Q16611 211 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 C8orf82Q6P1X6 216 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 MYPOPQ86VE0 399 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 FAM223AQ8IWN6 122 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 RPUSD4Q96CM3 377 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 TNFRSF13BO14836 293 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGFBP3P17936 291 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 SLURP1P55000 103 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 CKS1BP61024 79 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 BTN1A1Q13410 526 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 C10orf113Q5VZT2 155 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 C2orf50Q96LR7 162 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 MRPS18AQ9NVS2 196 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 B2MP61769 119 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 AANATQ16613 207 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 SLC25A48Q6ZT89 311 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 SLC7A5P1Q8MH63 180 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM18Q96B42 140 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 CSTL1Q9H114 145 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF430Q9H8G1 570 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 DNAJC4Q9NNZ3 241 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGKV1OR2-108A0A075B7D4 117 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 A0A0B4J2A0 478 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 NDUFC2O95298 119 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 OTX1P32242 354 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 CNN1P51911 297 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 UBE2L3P68036 154 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 C5orf17Q8NAS9 161 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGF2BP2-AS1Q96M15 143 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 SHPKQ9UHJ6 478 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 CCL1P22362 96 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 HERVK_113P61574 105 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 PSG5Q15238 335 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR2C3Q8N628 320 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR5H6Q8NGV6 325 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 SMIM4Q8WVI0 70 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNRD1Q9P1U0 126 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 MMP24Q9Y5R2 645 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 ATRQ13535 2644 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 PLXNB1O43157 2135 aa4.54□□□□□ -1.68
CDC42BPA-209ENST00000448940 UBE2L5PA0A1B0GUS4 154 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 LEPP41159 167 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 MTFP1Q9UDX5 166 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 CFAP46Q8IYW2 2715 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 B4DEV8 164 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 SMLR1H3BR10 107 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 SAA1P0DJI8 122 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 MPZP25189 248 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 PRCDQ00LT1 54 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF319Q9P2F9 582 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 TRAV24A0A0B4J272 114 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 A0A0J9YY99 117 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 OVOL3O00110 214 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 CST7O76096 145 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 P0DMU3 169 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 FAM231AP0DMU4 169 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 FAM231CP0DMU5 169 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 PLAC9Q5JTB6 97 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 TEPPQ6URK8 271 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 VKORC1L1Q8N0U8 176 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 SIGMAR1Q99720 223 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM14BQ9NUH8 114 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF503-AS2A6NEH8 195 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 DEFB4AO15263 64 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 CDK2AP2O75956 126 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 CD7P09564 240 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 S100A11P31949 105 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 PARD6GQ9BYG4 376 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 TRAV5A0A0B4J249 113 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 TAAR5O14804 337 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 SNRPCP09234 159 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 RPL29P47914 159 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF562Q6V9R5 426 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF497Q6ZNH5 498 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR51G1Q8NGK1 321 aa4.53□□□□□ -1.68
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