RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-208	ENST00000448611	TRBV20OR9-2	A0A075B6H5	130 aa		13.91	□□□□□ -0.18
LMNA-208	ENST00000448611	CLDN34	H7C241	214 aa		13.91	□□□□□ -0.18
LMNA-208	ENST00000448611	AVP	P01185	164 aa		13.91	□□□□□ -0.18
LMNA-208	ENST00000448611	RAB5A	P20339	215 aa		13.91	□□□□□ -0.18
LMNA-208	ENST00000448611	GATA3	P23771	443 aa		13.91	□□□□□ -0.18
LMNA-208	ENST00000448611	ELOB	Q15370	118 aa		13.91	□□□□□ -0.18
LMNA-208	ENST00000448611	ZNF343	Q6P1L6	599 aa		13.91	□□□□□ -0.18
LMNA-208	ENST00000448611	LINC01551	Q86U37	167 aa		13.91	□□□□□ -0.18
LMNA-208	ENST00000448611	SSX3	Q99909	188 aa		13.91	□□□□□ -0.18
LMNA-208	ENST00000448611		F8W735	103 aa	Predicted RBP	13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	ATP6V0E1	O15342	81 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	RD3L	P0DJH9	198 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	KLK9	Q2XQG4	91 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	TMEM219	Q86XT9	240 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	THYN1	Q9P016	225 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	KLK9	Q9UKQ9	250 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	SOX21	Q9Y651	276 aa	Predicted RBP	13.9	□□□□□ -0.18
LMNA-208	ENST00000448611		S4R3C0	116 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	NDUFB8	O95169	186 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	FABP1	P07148	127 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	MFAP4	P55083	255 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	LINC01356	Q8N9X3	169 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	STXBP6	Q8NFX7	210 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.9	□□□□□ -0.18
LMNA-208	ENST00000448611		Q8WTZ3	238 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	BEX4	Q9NWD9	120 aa	Predicted RBP	13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	MLX	Q9UH92	298 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	MOB4	Q9Y3A3	225 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	URGCP-MRPS24	S4R325	110 aa		13.9	□□□□□ -0.18
LMNA-208	ENST00000448611	UNC79	Q9P2D8	2635 aa		13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	SH2D7	A6NKC9	451 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	LINC01548	A6NM66	108 aa		13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	TOMM40	O96008	361 aa		13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	LYZ	P61626	148 aa		13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	UNQ5815/PRO19632	Q6UWF5	114 aa		13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	MRPL27	Q9P0M9	148 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	HIGD1A	Q9Y241	93 aa		13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	POLQ	O75417	2590 aa		13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	ABCA1	O95477	2261 aa		13.89	□□□□□ -0.19
LMNA-208	ENST00000448611	TRAV30	A0A087WSZ9	112 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	OR2J3	O76001	311 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	AMY1A	P04745	511 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	CRYBB3	P26998	211 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	SUMO1	P63165	101 aa	Known RBP	13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	C16orf82	Q7Z2V1	217 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	TMUB1	Q9BVT8	246 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	C21orf62	Q9NYP8	219 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	CSMD1	Q96PZ7	3565 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	PGPEP1L	A6NFU8	196 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	GNG7	O60262	68 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	CXCL1	P09341	107 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	YPEL3	P61236	119 aa	Predicted RBP	13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	FLI1	Q01543	452 aa	Predicted RBP	13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	ECSCR	Q19T08	205 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	DEFB113	Q30KQ7	82 aa		13.88	□□□□□ -0.19
LMNA-208	ENST00000448611	GP9	P14770	177 aa		13.87	□□□□□ -0.19
LMNA-208	ENST00000448611	HIST1H1B	P16401	226 aa	Known RBP	13.87	□□□□□ -0.19
LMNA-208	ENST00000448611	RPL35	P42766	123 aa	Known RBP	13.87	□□□□□ -0.19
LMNA-208	ENST00000448611	ZNF491	Q8N8L2	437 aa		13.87	□□□□□ -0.19
LMNA-208	ENST00000448611	C2CD4C	Q8TF44	421 aa		13.87	□□□□□ -0.19
LMNA-208	ENST00000448611	TMEM68	Q96MH6	324 aa		13.87	□□□□□ -0.19
LMNA-208	ENST00000448611	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.87	□□□□□ -0.19
LMNA-208	ENST00000448611	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.87	□□□□□ -0.19
LMNA-208	ENST00000448611	BAHCC1	Q9P281	2608 aa		13.87	□□□□□ -0.19
LMNA-208	ENST00000448611	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611		C9JCJ5	164 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611	LOXL1	Q08397	574 aa	Predicted RBP	13.86	□□□□□ -0.19
LMNA-208	ENST00000448611	LRRC75A-AS1	Q8N1F1	130 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611	ANAPC16	Q96DE5	110 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611	ELOVL1	Q9BW60	279 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611	FBXL7	Q9UJT9	491 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611		G3V318	75 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611		Q56UQ5	140 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611	LEMD1	Q68G75	181 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611	OCC1	Q8TAD7	63 aa		13.86	□□□□□ -0.19
LMNA-208	ENST00000448611	TRBV9	A0A0B4J1U6	114 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611		H3BUX3	64 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611		H7BYZ3	331 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611	CD99	P14209	185 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611	FCGR2B	P31994	310 aa	Predicted RBP	13.85	□□□□□ -0.19
LMNA-208	ENST00000448611	MYCNOS	P40205	109 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611	ZNF329	Q86UD4	541 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611	MAPK1IP1L	Q8NDC0	245 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611	VN1R17P	Q8TDU5	208 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611	RNF125	Q96EQ8	232 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611	LY96	Q9Y6Y9	160 aa		13.85	□□□□□ -0.19
LMNA-208	ENST00000448611		A6NDX4	124 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	C1orf196	B1AJZ1	125 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	RNF223	E7ERA6	249 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	IGHV3-23	P01764	117 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	IL4	P05112	153 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	TMEM14C	Q9P0S9	112 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	ANKRD17	O75179	2603 aa	Known RBP	13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	HELT	A6NFD8	242 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611		J3QLI3	93 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	PFN1	P07737	140 aa	Known RBP	13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	SNRPC	P09234	159 aa	Known RBP	13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	C19orf54	Q5BKX5	351 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	ZFP82	Q8N141	532 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms