RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 KCNIP3Q9Y2W7 256 aa20.4■□□□□ 0.86
CBX4-202ENST00000448310 LYZL2Q7Z4W2 148 aa20.39■□□□□ 0.85
CBX4-202ENST00000448310 CENPSQ8N2Z9 138 aa20.39■□□□□ 0.85
CBX4-202ENST00000448310 DTD1Q8TEA8 209 aa20.39■□□□□ 0.85
CBX4-202ENST00000448310 KRTAP17-1Q9BYP8 105 aa20.39■□□□□ 0.85
CBX4-202ENST00000448310 HSPB7Q9UBY9 170 aa20.39■□□□□ 0.85
CBX4-202ENST00000448310 H3BMM0 161 aa20.38■□□□□ 0.85
CBX4-202ENST00000448310 GSTZ1O43708 216 aaPredicted RBP20.38■□□□□ 0.85
CBX4-202ENST00000448310 AKR1C4P17516 323 aa20.38■□□□□ 0.85
CBX4-202ENST00000448310 LGI3Q8N145 548 aa20.38■□□□□ 0.85
CBX4-202ENST00000448310 PBDC1Q9BVG4 233 aa20.38■□□□□ 0.85
CBX4-202ENST00000448310 U3KQ87 197 aa20.38■□□□□ 0.85
CBX4-202ENST00000448310 CCR6P51684 374 aa20.37■□□□□ 0.85
CBX4-202ENST00000448310 DEFB1P60022 68 aa20.37■□□□□ 0.85
CBX4-202ENST00000448310 SUPT4H1P63272 117 aaKnown RBP20.37■□□□□ 0.85
CBX4-202ENST00000448310 SMCO1Q147U7 214 aa20.37■□□□□ 0.85
CBX4-202ENST00000448310 C12orf74Q32Q52 190 aa20.37■□□□□ 0.85
CBX4-202ENST00000448310 DYNC2LI1Q8TCX1 351 aa20.37■□□□□ 0.85
CBX4-202ENST00000448310 RNF125Q96EQ8 232 aa20.37■□□□□ 0.85
CBX4-202ENST00000448310 MCUBQ9NWR8 336 aa20.37■□□□□ 0.85
CBX4-202ENST00000448310 CACFD1Q9UGQ2 172 aa20.37■□□□□ 0.85
CBX4-202ENST00000448310 SCP2D1Q9UJQ7 156 aa20.37■□□□□ 0.85
CBX4-202ENST00000448310 A0A0B4J2A0 478 aa20.36■□□□□ 0.85
CBX4-202ENST00000448310 NUTF2P61970 127 aaKnown RBP20.36■□□□□ 0.85
CBX4-202ENST00000448310 C1QTNF4Q9BXJ3 329 aa20.36■□□□□ 0.85
CBX4-202ENST00000448310 SEPSECSQ9HD40 501 aaKnown RBP20.36■□□□□ 0.85
CBX4-202ENST00000448310 CCDC59Q9P031 241 aaKnown RBP20.36■□□□□ 0.85
CBX4-202ENST00000448310 SHPKQ9UHJ6 478 aa20.36■□□□□ 0.85
CBX4-202ENST00000448310 KLF9Q13886 244 aaPredicted RBP20.35■□□□□ 0.85
CBX4-202ENST00000448310 GDF5OSQ5U4N7 250 aa20.35■□□□□ 0.85
CBX4-202ENST00000448310 GSG1LQ6UXU4 331 aa20.35■□□□□ 0.85
CBX4-202ENST00000448310 RABL2AQ9UBK7 228 aaPredicted RBP20.35■□□□□ 0.85
CBX4-202ENST00000448310 RABL2BQ9UNT1 228 aa20.35■□□□□ 0.85
CBX4-202ENST00000448310 HLA-DRB4P13762 266 aa20.34■□□□□ 0.85
CBX4-202ENST00000448310 ZNF90Q03938 601 aa20.34■□□□□ 0.85
CBX4-202ENST00000448310 SCGB3A2Q96PL1 93 aa20.34■□□□□ 0.85
CBX4-202ENST00000448310 SCRT1Q9BWW7 348 aa20.34■□□□□ 0.85
CBX4-202ENST00000448310 HLA-DRB4X5D2U9 266 aa20.34■□□□□ 0.85
CBX4-202ENST00000448310 IGKV1D-37A0A075B6S9 117 aa20.33■□□□□ 0.85
CBX4-202ENST00000448310 DEFB131BA0A096LNP1 70 aa20.33■□□□□ 0.85
CBX4-202ENST00000448310 ZFP92A6NM28 416 aa20.33■□□□□ 0.85
CBX4-202ENST00000448310 IGKV3-20P01619 116 aa20.33■□□□□ 0.85
CBX4-202ENST00000448310 RAB2BQ8WUD1 216 aa20.33■□□□□ 0.85
CBX4-202ENST00000448310 RNF126Q9BV68 326 aa20.33■□□□□ 0.85
CBX4-202ENST00000448310 WDR12Q9GZL7 423 aaKnown RBP20.33■□□□□ 0.85
CBX4-202ENST00000448310 NKX2-1P43699 371 aaPredicted RBP20.32■□□□□ 0.84
CBX4-202ENST00000448310 FXYD7P58549 80 aa20.32■□□□□ 0.84
CBX4-202ENST00000448310 GAMTQ14353 236 aa20.32■□□□□ 0.84
CBX4-202ENST00000448310 OR1S1Q8NH92 325 aa20.32■□□□□ 0.84
CBX4-202ENST00000448310 LINC00052Q96N35 136 aa20.32■□□□□ 0.84
CBX4-202ENST00000448310 RSL24D1Q9UHA3 163 aaKnown RBP20.32■□□□□ 0.84
CBX4-202ENST00000448310 SLC35E1Q96K37 410 aa20.31■□□□□ 0.84
CBX4-202ENST00000448310 LYZP61626 148 aa20.3■□□□□ 0.84
CBX4-202ENST00000448310 OR8G2PQ6IF36 304 aa20.3■□□□□ 0.84
CBX4-202ENST00000448310 KIAA1109Q2LD37 5005 aa20.3■□□□□ 0.84
CBX4-202ENST00000448310 DNAH2Q9P225 4427 aa20.3■□□□□ 0.84
CBX4-202ENST00000448310 FAT2Q9NYQ8 4349 aa20.29■□□□□ 0.84
CBX4-202ENST00000448310 AMBPP02760 352 aa20.29■□□□□ 0.84
CBX4-202ENST00000448310 ANXA3P12429 323 aa20.29■□□□□ 0.84
CBX4-202ENST00000448310 GPX4P36969 197 aaPredicted RBP20.29■□□□□ 0.84
CBX4-202ENST00000448310 NUP62P37198 522 aaPredicted RBP20.29■□□□□ 0.84
CBX4-202ENST00000448310 OR2F1Q13607 317 aa20.29■□□□□ 0.84
CBX4-202ENST00000448310 SOSTQ9BQB4 213 aa20.29■□□□□ 0.84
CBX4-202ENST00000448310 SLIRPQ9GZT3 109 aaKnown RBP20.29■□□□□ 0.84
CBX4-202ENST00000448310 DNAH17Q9UFH2 4485 aa20.28■□□□□ 0.84
CBX4-202ENST00000448310 FABP12A6NFH5 140 aa20.28■□□□□ 0.84
CBX4-202ENST00000448310 IAPPP10997 89 aa20.28■□□□□ 0.84
CBX4-202ENST00000448310 TNFSF8P32971 234 aa20.28■□□□□ 0.84
CBX4-202ENST00000448310 TMBIM6P55061 237 aa20.28■□□□□ 0.84
CBX4-202ENST00000448310 SRPXP78539 464 aa20.28■□□□□ 0.84
CBX4-202ENST00000448310 ZNF705AQ6ZN79 300 aaPredicted RBP20.28■□□□□ 0.84
CBX4-202ENST00000448310 IGHV3OR16-12A0A075B7B8 117 aa20.27■□□□□ 0.84
CBX4-202ENST00000448310 EMP1P54849 157 aa20.27■□□□□ 0.84
CBX4-202ENST00000448310 TMED4Q7Z7H5 227 aa20.27■□□□□ 0.84
CBX4-202ENST00000448310 SAV1Q9H4B6 383 aaPredicted RBP20.27■□□□□ 0.84
CBX4-202ENST00000448310 PFDN2Q9UHV9 154 aa20.27■□□□□ 0.84
CBX4-202ENST00000448310 ZNF705FA8MVS1 300 aaPredicted RBP20.26■□□□□ 0.83
CBX4-202ENST00000448310 SOCS3O14543 225 aa20.26■□□□□ 0.83
CBX4-202ENST00000448310 ZNF705DP0CH99 300 aaPredicted RBP20.26■□□□□ 0.83
CBX4-202ENST00000448310 ZNF705BP0CI00 300 aaPredicted RBP20.26■□□□□ 0.83
CBX4-202ENST00000448310 COQ8AQ8NI60 647 aa20.26■□□□□ 0.83
CBX4-202ENST00000448310 PAIP2BQ9ULR5 123 aaKnown RBP20.26■□□□□ 0.83
CBX4-202ENST00000448310 PITX3O75364 302 aa20.25■□□□□ 0.83
CBX4-202ENST00000448310 ID1P41134 155 aa20.25■□□□□ 0.83
CBX4-202ENST00000448310 PSMB3P49720 205 aa20.25■□□□□ 0.83
CBX4-202ENST00000448310 ATP5IP56385 69 aaPredicted RBP20.25■□□□□ 0.83
CBX4-202ENST00000448310 FOXI2Q6ZQN5 318 aa20.25■□□□□ 0.83
CBX4-202ENST00000448310 OR4B1Q8NGF8 309 aa20.25■□□□□ 0.83
CBX4-202ENST00000448310 PPP1R14BQ96C90 147 aa20.25■□□□□ 0.83
CBX4-202ENST00000448310 NEU1Q99519 415 aa20.25■□□□□ 0.83
CBX4-202ENST00000448310 BCL7BQ9BQE9 202 aa20.25■□□□□ 0.83
CBX4-202ENST00000448310 ZNF709Q8N972 641 aa20.24■□□□□ 0.83
CBX4-202ENST00000448310 NDUFAF3Q9BU61 184 aa20.24■□□□□ 0.83
CBX4-202ENST00000448310 IGKV1OR2-108A0A075B7D4 117 aa20.23■□□□□ 0.83
CBX4-202ENST00000448310 SNRPGP15A8MWD9 76 aa20.23■□□□□ 0.83
CBX4-202ENST00000448310 F6UB75 175 aa20.23■□□□□ 0.83
CBX4-202ENST00000448310 H3BMQ9 156 aa20.23■□□□□ 0.83
CBX4-202ENST00000448310 FABP1P07148 127 aa20.23■□□□□ 0.83
CBX4-202ENST00000448310 C1orf194Q5T5A4 169 aa20.23■□□□□ 0.83
CBX4-202ENST00000448310 MCFD2Q8NI22 146 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms