RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 SMIM27A0A1W2PRY6 76 aa7.55□□□□□ -1.2
KLHL3-202ENST00000447439 A0A1W2PS18 150 aa7.55□□□□□ -1.2
KLHL3-202ENST00000447439 VWC2LB2RUY7 222 aa7.55□□□□□ -1.2
KLHL3-202ENST00000447439 M0QZ24 198 aa7.55□□□□□ -1.2
KLHL3-202ENST00000447439 AMY1AP04745 511 aa7.55□□□□□ -1.2
KLHL3-202ENST00000447439 VSTM2AQ8TAG5 236 aa7.55□□□□□ -1.2
KLHL3-202ENST00000447439 C2orf88Q9BSF0 95 aa7.55□□□□□ -1.2
KLHL3-202ENST00000447439 MRPL32Q9BYC8 188 aaKnown RBP7.55□□□□□ -1.2
KLHL3-202ENST00000447439 TLN1Q9Y490 2541 aaKnown RBP7.54□□□□□ -1.2
KLHL3-202ENST00000447439 IGHV2-26A0A0B4J1V2 119 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 KIR2DL5BA0A0G2JN68 375 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 KIR2DL5BA0A0G2JPC4 375 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 APCSP02743 223 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 FBLN7Q53RD9 439 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 KIR2DL5AQ8N109 375 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 PNKDQ8N490 385 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 NUP35Q8NFH5 326 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 C19orf24Q9BVV8 132 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 GPX1P07203 203 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 RPL27AP46776 148 aaKnown RBP7.54□□□□□ -1.2
KLHL3-202ENST00000447439 SUB1P53999 127 aaKnown RBP eCLIP7.54□□□□□ -1.2
KLHL3-202ENST00000447439 BPIFB3P59826 476 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 LYZP61626 148 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 CDSNQ15517 529 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 MAJINQ3KP22 176 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 LDLRAD2Q5SZI1 272 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 LCN12Q6JVE5 192 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 SPACA3Q8IXA5 215 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 BEND2Q8NDZ0 799 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 NRN1Q9NPD7 142 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 JKAMPQ9P055 326 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 INSIG2Q9Y5U4 225 aa7.54□□□□□ -1.2
KLHL3-202ENST00000447439 BRS3P32247 399 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 Q0VG73 95 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 PMCHL1Q16048 86 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 TBR1Q16650 682 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 Q8N976 141 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 OR1L4Q8NGR5 311 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 NEU1Q99519 415 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 ARHGAP32A7KAX9 2087 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 TRBV9A0A0B4J1U6 114 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 IGHV1-3A0A0C4DH29 117 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 IZUMO1RA6ND01 250 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 HIGD1CA8MV81 97 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 DIRC3C9JPN6 131 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 SIAH2O43255 324 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 UBE2G1P62253 170 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 PAFAH1B2P68402 229 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 PLGLAQ15195 96 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 KLF17Q5JT82 389 aaPredicted RBP7.53□□□□□ -1.2
KLHL3-202ENST00000447439 EXOC3-AS1Q8N2X6 119 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 THAP8Q8NA92 274 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 VAMP8Q9BV40 100 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 ZNF331Q9NQX6 463 aaPredicted RBP7.53□□□□□ -1.2
KLHL3-202ENST00000447439 ONECUT1Q9UBC0 465 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 ZNF835Q9Y2P0 537 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 SIGLEC9Q9Y336 463 aa7.53□□□□□ -1.2
KLHL3-202ENST00000447439 SH2D7A6NKC9 451 aaPredicted RBP7.52□□□□□ -1.21
KLHL3-202ENST00000447439 TCAPO15273 167 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 RBP4P02753 201 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 ESDP10768 282 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 ZNF137PP52743 207 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 FOXA3P55318 350 aaPredicted RBP7.52□□□□□ -1.21
KLHL3-202ENST00000447439 SSTP61278 116 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 LINC00311Q8N616 119 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 OR2D3Q8NGH3 330 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 OR4A5Q8NH83 315 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 TSKUQ8WUA8 353 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 KCNS1Q96KK3 526 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 EPDR1Q9UM22 224 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 HILPDAQ9Y5L2 63 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 ABCA4P78363 2273 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 SPTA1P02549 2419 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 NBEAP1P0C6P0 100 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 NUTF2P61970 127 aaKnown RBP7.52□□□□□ -1.21
KLHL3-202ENST00000447439 KLRD1Q13241 179 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 WDR73Q6P4I2 378 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 TEX43Q6ZNM6 134 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 SVIPQ8NHG7 77 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 C17orf77Q96MU5 243 aa7.52□□□□□ -1.21
KLHL3-202ENST00000447439 TEX22C9J3V5 150 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 INS-IGF2F8WCM5 200 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 BUB1B-PAK6H3BSN5 160 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 PSG1P11464 419 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 MC5RP33032 325 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 RPL19P84098 196 aaKnown RBP7.51□□□□□ -1.21
KLHL3-202ENST00000447439 CYB5R2Q6BCY4 276 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 NIT1Q86X76 327 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 BCL6BQ8N143 479 aaPredicted RBP7.51□□□□□ -1.21
KLHL3-202ENST00000447439 CIARTQ8N365 385 aaPredicted RBP7.51□□□□□ -1.21
KLHL3-202ENST00000447439 ZNF596Q8TC21 504 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 C18orf32Q8TCD1 76 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 MBD6Q96DN6 1003 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 PERPQ96FX8 193 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 PGLYRP4Q96LB8 373 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 RNF2Q99496 336 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 C7orf69Q9H7B7 122 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 ZNF586Q9NXT0 402 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 TP73-AS1Q9UF72 201 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms