RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 C8orf88P0DMB2 117 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 RPL12P30050 165 aaKnown RBP10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 ELLP55199 621 aaPredicted RBP10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 RAP2BP61225 183 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 LYZP61626 148 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 EGFEM1PQ0D2K5 195 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 CD300EQ496F6 205 aaPredicted RBP10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 OR5C1Q8NGR4 320 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 Q8WTZ3 238 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 ST8SIA2Q92186 375 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 MGST2Q99735 147 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 PBDC1Q9BVG4 233 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 SMIM3Q9BZL3 60 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 HSPB11Q9Y547 144 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 FBN3Q75N90 2809 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 FXYD6-FXYD2A0A087WZ82 144 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 WI2-2373I1.2A0A1W2PRP0 233 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 K7EMT4 169 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 INSL3P51460 131 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 VWC2Q2TAL6 325 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 DEFB114Q30KQ6 69 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 TMEM61Q8N0U2 210 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 RNF125Q96EQ8 232 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 TMEM147Q9BVK8 224 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 GPR61Q9BZJ8 451 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 SLC25A31Q9H0C2 315 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 NPVFQ9HCQ7 196 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 UQCC1Q9NVA1 299 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 AURKAIP1Q9NWT8 199 aaPredicted RBP10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 SIGLEC8Q9NYZ4 499 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 DOK5Q9P104 306 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 SMPXQ9UHP9 88 aa10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 LSM4Q9Y4Z0 139 aaKnown RBP10.01□□□□□ -0.81
HLA-DOB-207ENST00000447394 MEGF8Q7Z7M0 2845 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 FNDC10F2Z333 226 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 CHEK1O14757 476 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 S100A11P31949 105 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 HBG1P69891 147 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 HBG2P69892 147 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 BAXQ07812 192 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 TEPPQ6URK8 271 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 STPG3Q8N7X2 389 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 RNF2Q99496 336 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 GINS3Q9BRX5 216 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 GGACTQ9BVM4 153 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 RHPN1-AS1Q9BWJ2 59 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 WFDC1Q9HC57 220 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 MRPL27Q9P0M9 148 aaKnown RBP10□□□□□ -0.81
HLA-DOB-207ENST00000447394 WDR83OSQ9Y284 106 aa10□□□□□ -0.81
HLA-DOB-207ENST00000447394 IGKV3-7A0A075B6H7 116 aa9.99□□□□□ -0.81
HLA-DOB-207ENST00000447394 AGPAT2O15120 278 aa9.99□□□□□ -0.81
HLA-DOB-207ENST00000447394 FGF7P21781 194 aa9.99□□□□□ -0.81
HLA-DOB-207ENST00000447394 DEFA6Q01524 100 aa9.99□□□□□ -0.81
HLA-DOB-207ENST00000447394 BPIFCQ8NFQ6 507 aa9.99□□□□□ -0.81
HLA-DOB-207ENST00000447394 MARC2Q969Z3 335 aa9.99□□□□□ -0.81
HLA-DOB-207ENST00000447394 METTL26Q96S19 204 aa9.99□□□□□ -0.81
HLA-DOB-207ENST00000447394 ZNF256Q9Y2P7 627 aaPredicted RBP9.99□□□□□ -0.81
HLA-DOB-207ENST00000447394 SORL1Q92673 2214 aa9.99□□□□□ -0.81
HLA-DOB-207ENST00000447394 RNF222A6NCQ9 220 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 HNRNPCP07910 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 LINC00869P0C866 280 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 ORM2P19652 201 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 NPPCP23582 126 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 CRYBB3P26998 211 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 FGL1Q08830 312 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 MIC13Q5XKP0 118 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 OR1B1Q8NGR6 318 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 ASB13Q8WXK3 278 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 ST6GAL2Q96JF0 529 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 ATP5SQ99766 215 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 GGTLC1Q9BX51 225 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 FBXL17Q9UF56 701 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 SLC45A2Q9UMX9 530 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 RFNGQ9Y644 331 aa9.98□□□□□ -0.81
HLA-DOB-207ENST00000447394 ZNF785A8K8V0 405 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 DFFBO76075 338 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 FABP1P07148 127 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 GP9P14770 177 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 CAMLGP49069 296 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 AP2S1P53680 142 aaPredicted RBP9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 CD300CQ08708 224 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 GUCA2BQ16661 112 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 ATP6V1FQ16864 119 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 LCN12Q6JVE5 192 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 OR11H4Q8NGC9 324 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 AQP10Q96PS8 301 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 VSIRQ9H7M9 311 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 TECRQ9NZ01 308 aaKnown RBP9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 RABAC1Q9UI14 185 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 TNFSF18Q9UNG2 199 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 U3KQE9 123 aa9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 PRKDCP78527 4128 aaKnown RBP9.97□□□□□ -0.81
HLA-DOB-207ENST00000447394 K7EIL1 84 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 ARPC5O15511 151 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 TFPI2P48307 235 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 EIF2B2P49770 351 aaKnown RBP9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 OPCMLQ14982 345 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 LEMD1Q68G75 181 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 TCF24Q7RTU0 167 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms