RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
DDX56-206ENST00000446987 SIGLEC8Q9NYZ4 499 aa10.66□□□□□ -0.7
DDX56-206ENST00000446987 SPCS1Q9Y6A9 102 aa10.66□□□□□ -0.7
DDX56-206ENST00000446987 OTOGQ6ZRI0 2925 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 A0A087X0K7 114 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 CD3EP07766 207 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 ZNF32P17041 273 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 GCHFRP30047 84 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 SLAQ13239 276 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 TIGITQ495A1 244 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 ZNF672Q499Z4 452 aaPredicted RBP10.65□□□□□ -0.7
DDX56-206ENST00000446987 CCDC144NLQ6NUI1 221 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 H1FXQ92522 213 aaKnown RBP10.65□□□□□ -0.7
DDX56-206ENST00000446987 ST6GALNAC6Q969X2 333 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.65□□□□□ -0.7
DDX56-206ENST00000446987 PPP1R3CQ9UQK1 317 aa10.65□□□□□ -0.7
DDX56-206ENST00000446987 YTHDF2Q9Y5A9 579 aaKnown RBP10.65□□□□□ -0.7
DDX56-206ENST00000446987 VPS13CQ709C8 3753 aa10.65□□□□□ -0.71
DDX56-206ENST00000446987 MAST4O15021 2626 aa10.65□□□□□ -0.71
DDX56-206ENST00000446987 NAV2Q8IVL1 2488 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.64□□□□□ -0.71
DDX56-206ENST00000446987 hDV102S1A0JD36 115 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 E7EQL1 145 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 LIPFP07098 398 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 FGF12P61328 243 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 RNASEKQ6P5S7 137 aaKnown RBP10.64□□□□□ -0.71
DDX56-206ENST00000446987 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 FAM231DQ6ZW35 169 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 OR9G4Q8NGQ1 327 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 OR4A16Q8NH70 328 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 OR2T6Q8NHC8 308 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 NANOS1Q8WY41 292 aaKnown RBP10.64□□□□□ -0.71
DDX56-206ENST00000446987 GEMIN7Q9H840 131 aaKnown RBP10.64□□□□□ -0.71
DDX56-206ENST00000446987 ZNF257Q9Y2Q1 563 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 TRAV38-1A0A0B4J264 116 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 HELTA6NFD8 242 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 H3BUT2 72 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 K7EQM0 130 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 FABP2P12104 132 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 CEBPDP49716 269 aaPredicted RBP10.64□□□□□ -0.71
DDX56-206ENST00000446987 PPOXP50336 477 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 MSMPQ1L6U9 139 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 CENPWQ5EE01 88 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 LINC01545Q5VT33 79 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 LCNL1Q6ZST4 164 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 FGFRL1Q8N441 504 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 ZBTB34Q8NCN2 500 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 OR2Z1Q8NG97 314 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 MAP1LC3CQ9BXW4 147 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 UBTD1Q9HAC8 227 aa10.64□□□□□ -0.71
DDX56-206ENST00000446987 MRPL16Q9NX20 251 aaKnown RBP10.64□□□□□ -0.71
DDX56-206ENST00000446987 ARFGEF3Q5TH69 2177 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 TEX48A0A1B0GUV7 120 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 LEPROTL1O95214 131 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 IGLV2-14P01704 120 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 KRTAP27-1Q3LI81 207 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 MOB1BQ7L9L4 216 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 NHLRC2Q8NBF2 726 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 OR4X2Q8NGF9 303 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 OR2H1Q9GZK4 316 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 THYN1Q9P016 225 aa10.63□□□□□ -0.71
DDX56-206ENST00000446987 SLC25A10Q9UBX3 287 aaPredicted RBP10.63□□□□□ -0.71
DDX56-206ENST00000446987 F8W1H4 67 aa10.62□□□□□ -0.71
DDX56-206ENST00000446987 IBA57Q5T440 356 aaKnown RBP10.62□□□□□ -0.71
DDX56-206ENST00000446987 KIR3DL3Q8N743 410 aa10.62□□□□□ -0.71
DDX56-206ENST00000446987 TPRX1Q8N7U7 411 aa10.62□□□□□ -0.71
DDX56-206ENST00000446987 ZNF611Q8N823 705 aa10.62□□□□□ -0.71
DDX56-206ENST00000446987 HSPB8Q9UJY1 196 aa10.62□□□□□ -0.71
DDX56-206ENST00000446987 TSSC4Q9Y5U2 329 aaPredicted RBP10.62□□□□□ -0.71
DDX56-206ENST00000446987 PRRC2AP48634 2157 aaKnown RBP10.62□□□□□ -0.71
DDX56-206ENST00000446987 CCL2P13500 99 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 KIR3DS1Q14943 382 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 TRAPPC2LQ9UL33 140 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 CCDC168Q8NDH2 2452 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 MYO9AB2RTY4 2548 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 H0Y8G0 127 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
DDX56-206ENST00000446987 LTC4SQ16873 150 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 RTL8BQ17RB0 113 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 C11orf71Q6IPW1 123 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 DTX2Q86UW9 622 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 URB1-AS1Q96HZ7 61 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 TMEM167BQ9NRX6 74 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 JPT1Q9UK76 154 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 CELSR1Q9NYQ6 3014 aa10.61□□□□□ -0.71
DDX56-206ENST00000446987 ZNF469Q96JG9 3925 aaPredicted RBP10.61□□□□□ -0.71
DDX56-206ENST00000446987 hCG_38984A0A1B0GV85 526 aa10.6□□□□□ -0.71
DDX56-206ENST00000446987 RRHO14718 337 aa10.6□□□□□ -0.71
DDX56-206ENST00000446987 SYNGR3O43761 229 aa10.6□□□□□ -0.71
DDX56-206ENST00000446987 APOA2P02652 100 aa10.6□□□□□ -0.71
DDX56-206ENST00000446987 SPATA46Q5T0L3 261 aa10.6□□□□□ -0.71
DDX56-206ENST00000446987 NUP37Q8NFH4 326 aa10.6□□□□□ -0.71
DDX56-206ENST00000446987 ZNF418Q8TF45 676 aaPredicted RBP10.6□□□□□ -0.71
DDX56-206ENST00000446987 SOX21Q9Y651 276 aaPredicted RBP10.6□□□□□ -0.71
DDX56-206ENST00000446987 USF3Q68DE3 2245 aa10.6□□□□□ -0.71
DDX56-206ENST00000446987 IGHV1-24A0A0C4DH33 117 aa10.59□□□□□ -0.71
DDX56-206ENST00000446987 ADH4P08319 380 aa10.59□□□□□ -0.71
DDX56-206ENST00000446987 FGF6P10767 208 aa10.59□□□□□ -0.71
DDX56-206ENST00000446987 PDLIM3Q53GG5 364 aaPredicted RBP10.59□□□□□ -0.71
DDX56-206ENST00000446987 ZNF841Q6ZN19 808 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms