RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PSG7Q13046 419 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 MORN2Q502X0 79 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 IQCF6A8MYZ5 107 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 M0R2P5 195 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 GHRHP01286 108 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 NUP35Q8NFH5 326 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 D6R8Y8 96 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 COX6B1P14854 86 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 LAGE3Q14657 143 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 SPSB3Q6PJ21 355 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 FAM216BQ8N7L0 139 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 RNF125Q96EQ8 232 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 MGST2Q99735 147 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 TMEM238C9JI98 176 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 SPATA31B1PQ5VZV4 182 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 DUX5Q96PT3 197 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 LINC00312Q9Y6C7 94 aa15.44■□□□□ 0.06
SHANK3-203ENST00000445220 TOMM7Q9P0U1 55 aa15.43■□□□□ 0.06
SHANK3-203ENST00000445220 DPM3Q9P2X0 92 aa15.43■□□□□ 0.06
SHANK3-203ENST00000445220 MTCL1Q9Y4B5 1905 aaKnown RBP15.43■□□□□ 0.06
SHANK3-203ENST00000445220 PRR19A6NJB7 356 aa15.43■□□□□ 0.06
SHANK3-203ENST00000445220 PFN1P07737 140 aaKnown RBP15.43■□□□□ 0.06
SHANK3-203ENST00000445220 C10orf91Q5T1B1 145 aa15.43■□□□□ 0.06
SHANK3-203ENST00000445220 BMPERQ8N8U9 685 aa15.42■□□□□ 0.06
SHANK3-203ENST00000445220 SMAD7O15105 426 aaKnown RBP15.42■□□□□ 0.06
SHANK3-203ENST00000445220 IGKV1-12A0A0C4DH73 117 aa15.42■□□□□ 0.06
SHANK3-203ENST00000445220 IGKV1D-12P01611 117 aa15.42■□□□□ 0.06
SHANK3-203ENST00000445220 CELA3AP09093 270 aa15.42■□□□□ 0.06
SHANK3-203ENST00000445220 CECR9P0C854 216 aa15.42■□□□□ 0.06
SHANK3-203ENST00000445220 RNASE4P34096 147 aaKnown RBP15.42■□□□□ 0.06
SHANK3-203ENST00000445220 SEPSECSQ9HD40 501 aaKnown RBP15.42■□□□□ 0.06
SHANK3-203ENST00000445220 A0A0G2JMZ2 1700 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 LRRC37A2A6NM11 1700 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 GGTLC3B5MD39 225 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 CDKN1AP38936 164 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 FAM231BA6NCW3 169 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 TNFRSF6BO95407 300 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 TRGV3P03979 118 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 IGLC2P0DOY2 106 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 IGLC3P0DOY3 106 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 LHX2P50458 406 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 C8orf46Q8TAG6 207 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 ARPC1AQ92747 370 aa15.41■□□□□ 0.06
SHANK3-203ENST00000445220 RSPO3Q9BXY4 272 aaPredicted RBP15.41■□□□□ 0.06
SHANK3-203ENST00000445220 C2orf82Q6UX34 121 aa15.4■□□□□ 0.06
SHANK3-203ENST00000445220 IGKV1-5P01602 117 aa15.4■□□□□ 0.06
SHANK3-203ENST00000445220 APOBEC3AP31941 199 aaPredicted RBP15.4■□□□□ 0.06
SHANK3-203ENST00000445220 RHOGP84095 191 aa15.4■□□□□ 0.06
SHANK3-203ENST00000445220 PIMREGQ9BSJ6 248 aa15.4■□□□□ 0.06
SHANK3-203ENST00000445220 CHAC1Q9BUX1 264 aa15.4■□□□□ 0.06
SHANK3-203ENST00000445220 FAM201AQ5SY85 155 aa15.4■□□□□ 0.06
SHANK3-203ENST00000445220 PPIFP30405 207 aaKnown RBP15.39■□□□□ 0.05
SHANK3-203ENST00000445220 RTN4RL2Q86UN3 420 aa15.39■□□□□ 0.05
SHANK3-203ENST00000445220 CACNA1EQ15878 2313 aa15.39■□□□□ 0.05
SHANK3-203ENST00000445220 TRAV21A0A0B4J279 112 aa15.39■□□□□ 0.05
SHANK3-203ENST00000445220 PLSCR4Q9NRQ2 329 aa15.39■□□□□ 0.05
SHANK3-203ENST00000445220 UNQ6494/PRO21346Q6UXR6 183 aa15.39■□□□□ 0.05
SHANK3-203ENST00000445220 NCR2O95944 276 aa15.39■□□□□ 0.05
SHANK3-203ENST00000445220 IGKV1D-33P01593 117 aa15.39■□□□□ 0.05
SHANK3-203ENST00000445220 IGKV1-33P01594 117 aa15.39■□□□□ 0.05
SHANK3-203ENST00000445220 SCN2AQ99250 2005 aa15.38■□□□□ 0.05
SHANK3-203ENST00000445220 IGHV3OR16-8A0A075B7F1 116 aa15.38■□□□□ 0.05
SHANK3-203ENST00000445220 ZC2HC1BQ5TFG8 222 aa15.38■□□□□ 0.05
SHANK3-203ENST00000445220 PPP1R27Q86WC6 154 aa15.38■□□□□ 0.05
SHANK3-203ENST00000445220 A0A1B0GWJ7 208 aa15.38■□□□□ 0.05
SHANK3-203ENST00000445220 MESP1Q9BRJ9 268 aa15.38■□□□□ 0.05
SHANK3-203ENST00000445220 TCRAP04437 139 aa15.37■□□□□ 0.05
SHANK3-203ENST00000445220 CHD5Q8TDI0 1954 aa15.37■□□□□ 0.05
SHANK3-203ENST00000445220 FOXH1O75593 365 aa15.37■□□□□ 0.05
SHANK3-203ENST00000445220 QRFPP83859 136 aa15.37■□□□□ 0.05
SHANK3-203ENST00000445220 IGHV2OR16-5A0A0B4J2B6 119 aa15.37■□□□□ 0.05
SHANK3-203ENST00000445220 CRYGSP22914 178 aa15.37■□□□□ 0.05
SHANK3-203ENST00000445220 ZFP36L1Q07352 338 aaKnown RBP15.37■□□□□ 0.05
SHANK3-203ENST00000445220 ZNF562Q6V9R5 426 aa15.37■□□□□ 0.05
SHANK3-203ENST00000445220 MUC6Q6W4X9 2439 aa15.37■□□□□ 0.05
SHANK3-203ENST00000445220 GREB1Q4ZG55 1949 aa15.37■□□□□ 0.05
SHANK3-203ENST00000445220 FAM57AQ8TBR7 257 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 CITED1Q99966 193 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 ACACAQ13085 2346 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 C9orf118A6NHY6 69 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 LYZL1Q6UWQ5 148 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 EDA2RQ9HAV5 297 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 NYNRINQ9P2P1 1898 aaKnown RBP15.36■□□□□ 0.05
SHANK3-203ENST00000445220 PDLIM4P50479 330 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 KLF12Q9Y4X4 402 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 TSSC4Q9Y5U2 329 aaPredicted RBP15.36■□□□□ 0.05
SHANK3-203ENST00000445220 LILRA1O75019 489 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 LGALS1P09382 135 aaKnown RBP15.36■□□□□ 0.05
SHANK3-203ENST00000445220 CD28P10747 220 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 PLEKHB2Q96CS7 222 aa15.36■□□□□ 0.05
SHANK3-203ENST00000445220 NPIPB5A8MRT5 1133 aa15.35■□□□□ 0.05
SHANK3-203ENST00000445220 K7EP13 123 aa15.35■□□□□ 0.05
SHANK3-203ENST00000445220 CLEC19AQ6UXS0 136 aa15.35■□□□□ 0.05
SHANK3-203ENST00000445220 SLC25A20O43772 301 aa15.35■□□□□ 0.05
SHANK3-203ENST00000445220 PRR31Q5SQ13 230 aa15.35■□□□□ 0.05
SHANK3-203ENST00000445220 SLC25A39Q9BZJ4 359 aaPredicted RBP15.35■□□□□ 0.05
SHANK3-203ENST00000445220 CD7P09564 240 aa15.35■□□□□ 0.05
SHANK3-203ENST00000445220 DUX3Q96PT4 197 aa15.35■□□□□ 0.05
SHANK3-203ENST00000445220 MORN3Q6PF18 240 aaPredicted RBP15.35■□□□□ 0.05
SHANK3-203ENST00000445220 CACNA1HO95180 2353 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms