RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 IL22RA2Q969J5 263 aa11.1□□□□□ -0.63
SEC13-213ENST00000445064 DIRAS2Q96HU8 199 aa11.1□□□□□ -0.63
SEC13-213ENST00000445064 PRRT1Q99946 306 aa11.1□□□□□ -0.63
SEC13-213ENST00000445064 PBDC1Q9BVG4 233 aa11.1□□□□□ -0.63
SEC13-213ENST00000445064 RBKSQ9H477 322 aa11.1□□□□□ -0.63
SEC13-213ENST00000445064 SEPSECSQ9HD40 501 aaKnown RBP11.1□□□□□ -0.63
SEC13-213ENST00000445064 U3KQ87 197 aa11.1□□□□□ -0.63
SEC13-213ENST00000445064 VPS13DQ5THJ4 4388 aa11.09□□□□□ -0.63
SEC13-213ENST00000445064 CTDSPLO15194 276 aa11.09□□□□□ -0.63
SEC13-213ENST00000445064 GSTZ1O43708 216 aaPredicted RBP11.09□□□□□ -0.63
SEC13-213ENST00000445064 IGKV3-20P01619 116 aa11.09□□□□□ -0.63
SEC13-213ENST00000445064 FXYD7P58549 80 aa11.09□□□□□ -0.63
SEC13-213ENST00000445064 KLF9Q13886 244 aaPredicted RBP11.09□□□□□ -0.63
SEC13-213ENST00000445064 GDF5OSQ5U4N7 250 aa11.09□□□□□ -0.63
SEC13-213ENST00000445064 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
SEC13-213ENST00000445064 DTD1Q8TEA8 209 aa11.09□□□□□ -0.63
SEC13-213ENST00000445064 CACFD1Q9UGQ2 172 aa11.09□□□□□ -0.63
SEC13-213ENST00000445064 ANKRD20A5PA0PJZ0 165 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 AKR1C4P17516 323 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 NKX2-1P43699 371 aaPredicted RBP11.08□□□□□ -0.64
SEC13-213ENST00000445064 CCR6P51684 374 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 ZNF90Q03938 601 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 GPR141Q7Z602 305 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 LGI3Q8N145 548 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 RNF125Q96EQ8 232 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 HSPB7Q9UBY9 170 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
SEC13-213ENST00000445064 IGHV3OR16-12A0A075B7B8 117 aa11.07□□□□□ -0.64
SEC13-213ENST00000445064 A0A0B4J2A0 478 aa11.07□□□□□ -0.64
SEC13-213ENST00000445064 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
SEC13-213ENST00000445064 ALDH3B2P48448 385 aa11.07□□□□□ -0.64
SEC13-213ENST00000445064 SUPT4H1P63272 117 aaKnown RBP11.07□□□□□ -0.64
SEC13-213ENST00000445064 GAMTQ14353 236 aa11.07□□□□□ -0.64
SEC13-213ENST00000445064 SMCO1Q147U7 214 aa11.07□□□□□ -0.64
SEC13-213ENST00000445064 ZNF705AQ6ZN79 300 aaPredicted RBP11.07□□□□□ -0.64
SEC13-213ENST00000445064 WDR12Q9GZL7 423 aaKnown RBP11.07□□□□□ -0.64
SEC13-213ENST00000445064 SHPKQ9UHJ6 478 aa11.07□□□□□ -0.64
SEC13-213ENST00000445064 SCP2D1Q9UJQ7 156 aa11.07□□□□□ -0.64
SEC13-213ENST00000445064 IGKV1D-37A0A075B6S9 117 aa11.06□□□□□ -0.64
SEC13-213ENST00000445064 AMBPP02760 352 aa11.06□□□□□ -0.64
SEC13-213ENST00000445064 EMP1P54849 157 aa11.06□□□□□ -0.64
SEC13-213ENST00000445064 POM121L12Q8N7R1 296 aa11.06□□□□□ -0.64
SEC13-213ENST00000445064 SCGB3A2Q96PL1 93 aa11.06□□□□□ -0.64
SEC13-213ENST00000445064 NEU1Q99519 415 aa11.06□□□□□ -0.64
SEC13-213ENST00000445064 NDUFAF3Q9BU61 184 aa11.06□□□□□ -0.64
SEC13-213ENST00000445064 MRPS26Q9BYN8 205 aaKnown RBP11.06□□□□□ -0.64
SEC13-213ENST00000445064 MCUBQ9NWR8 336 aa11.06□□□□□ -0.64
SEC13-213ENST00000445064 ZNF705FA8MVS1 300 aaPredicted RBP11.05□□□□□ -0.64
SEC13-213ENST00000445064 M0R2N4 97 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 ZNF705DP0CH99 300 aaPredicted RBP11.05□□□□□ -0.64
SEC13-213ENST00000445064 ZNF705BP0CI00 300 aaPredicted RBP11.05□□□□□ -0.64
SEC13-213ENST00000445064 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 P0DMU3 169 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 GPX4P36969 197 aaPredicted RBP11.05□□□□□ -0.64
SEC13-213ENST00000445064 OR2F1Q13607 317 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 OR8G2PQ6IF36 304 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 LINC00336Q6ZUF6 198 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 OR4B1Q8NGF8 309 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 OR1S1Q8NH92 325 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 DYNC2LI1Q8TCX1 351 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 SAV1Q9H4B6 383 aaPredicted RBP11.05□□□□□ -0.64
SEC13-213ENST00000445064 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 RABL2AQ9UBK7 228 aaPredicted RBP11.05□□□□□ -0.64
SEC13-213ENST00000445064 PFDN2Q9UHV9 154 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 RABL2BQ9UNT1 228 aa11.05□□□□□ -0.64
SEC13-213ENST00000445064 SMIM9A6NGZ8 99 aa11.04□□□□□ -0.64
SEC13-213ENST00000445064 SNRPGP15A8MWD9 76 aa11.04□□□□□ -0.64
SEC13-213ENST00000445064 NUP62P37198 522 aaPredicted RBP11.04□□□□□ -0.64
SEC13-213ENST00000445064 ID1P41134 155 aa11.04□□□□□ -0.64
SEC13-213ENST00000445064 LYZP61626 148 aa11.04□□□□□ -0.64
SEC13-213ENST00000445064 SLC35E1Q96K37 410 aa11.04□□□□□ -0.64
SEC13-213ENST00000445064 SLC35B3Q9H1N7 401 aa11.04□□□□□ -0.64
SEC13-213ENST00000445064 RSL24D1Q9UHA3 163 aaKnown RBP11.04□□□□□ -0.64
SEC13-213ENST00000445064 F6UB75 175 aa11.03□□□□□ -0.64
SEC13-213ENST00000445064 SOCS3O14543 225 aa11.03□□□□□ -0.64
SEC13-213ENST00000445064 ANXA3P12429 323 aa11.03□□□□□ -0.64
SEC13-213ENST00000445064 ATP5IP56385 69 aaPredicted RBP11.03□□□□□ -0.64
SEC13-213ENST00000445064 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
SEC13-213ENST00000445064 COQ8AQ8NI60 647 aa11.03□□□□□ -0.64
SEC13-213ENST00000445064 HERC2O95714 4834 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 A0A1B0GVY2 172 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 FABP12A6NFH5 140 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 IAPPP10997 89 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 TNFSF8P32971 234 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 PSMB3P49720 205 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 C1orf194Q5T5A4 169 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 OR8I2Q8N0Y5 310 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 ZNF709Q8N972 641 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 PPP1R14BQ96C90 147 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 SOSTQ9BQB4 213 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 CCDC59Q9P031 241 aaKnown RBP11.02□□□□□ -0.65
SEC13-213ENST00000445064 PAIP2BQ9ULR5 123 aaKnown RBP11.02□□□□□ -0.65
SEC13-213ENST00000445064 RFNGQ9Y644 331 aa11.02□□□□□ -0.65
SEC13-213ENST00000445064 IGKV1OR2-108A0A075B7D4 117 aa11.01□□□□□ -0.65
SEC13-213ENST00000445064 PITX3O75364 302 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms