RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PAFAH1B2P68402 229 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 BAXQ07812 192 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 FCN2Q15485 313 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 ATP6V1FQ16864 119 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 HAPLN4Q86UW8 402 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 TMEM252Q8N6L7 170 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 THAP8Q8NA92 274 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 PPP1R14BQ96C90 147 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 PBDC1Q9BVG4 233 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 RHPN1-AS1Q9BWJ2 59 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 UQCC1Q9NVA1 299 aa10.69□□□□□ -0.7
SSBP3-208ENST00000444533 AURKAIP1Q9NWT8 199 aaPredicted RBP10.69□□□□□ -0.7
SSBP3-208ENST00000444533 NBEAL1Q6ZS30 2694 aa10.68□□□□□ -0.7
SSBP3-208ENST00000444533 PRB2P02812 416 aaPredicted RBP10.68□□□□□ -0.7
SSBP3-208ENST00000444533 HNRNPCP07910 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
SSBP3-208ENST00000444533 GIPP09681 153 aaPredicted RBP10.68□□□□□ -0.7
SSBP3-208ENST00000444533 LYZP61626 148 aa10.68□□□□□ -0.7
SSBP3-208ENST00000444533 RPL11P62913 178 aaKnown RBP10.68□□□□□ -0.7
SSBP3-208ENST00000444533 DEFB121Q5J5C9 76 aa10.68□□□□□ -0.7
SSBP3-208ENST00000444533 LCE2DQ5TA82 110 aaPredicted RBP10.68□□□□□ -0.7
SSBP3-208ENST00000444533 MRAPQ8TCY5 172 aa10.68□□□□□ -0.7
SSBP3-208ENST00000444533 RNF125Q96EQ8 232 aa10.68□□□□□ -0.7
SSBP3-208ENST00000444533 TMEM147Q9BVK8 224 aa10.68□□□□□ -0.7
SSBP3-208ENST00000444533 ZFAND3Q9H8U3 227 aa10.68□□□□□ -0.7
SSBP3-208ENST00000444533 MLXQ9UH92 298 aa10.68□□□□□ -0.7
SSBP3-208ENST00000444533 PMS2P5A8MQ11 134 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 CCNKO75909 580 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 CXCL3P19876 107 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 RAP2BP61225 183 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 ZNF90Q03938 601 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 OR2F1Q13607 317 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 ZNF546Q86UE3 836 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 OR11H7Q8NGC8 314 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 PRR25Q96S07 402 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 OR5AC2Q9NZP5 309 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 RNF24Q9Y225 148 aa10.67□□□□□ -0.7
SSBP3-208ENST00000444533 FBN3Q75N90 2809 aa10.66□□□□□ -0.7
SSBP3-208ENST00000444533 IGHV3-49A0A0A0MS15 119 aa10.66□□□□□ -0.7
SSBP3-208ENST00000444533 IGSF23A1L1A6 192 aa10.66□□□□□ -0.7
SSBP3-208ENST00000444533 CHEK1O14757 476 aa10.66□□□□□ -0.7
SSBP3-208ENST00000444533 CRYBB3P26998 211 aa10.66□□□□□ -0.7
SSBP3-208ENST00000444533 EWSR1Q01844 656 aaKnown RBP eCLIP10.66□□□□□ -0.7
SSBP3-208ENST00000444533 ADAMTSL5Q6ZMM2 481 aa10.66□□□□□ -0.7
SSBP3-208ENST00000444533 CYP2G1PQ6ZSU1 146 aa10.66□□□□□ -0.7
SSBP3-208ENST00000444533 SPAG8Q99932 426 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-208ENST00000444533 C11orf1Q9H5F2 150 aa10.66□□□□□ -0.7
SSBP3-208ENST00000444533 MBD2Q9UBB5 411 aa10.66□□□□□ -0.7
SSBP3-208ENST00000444533 NOTCH1P46531 2555 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 IGKV1D-37A0A075B6S9 117 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 IGHV3OR16-13A0A075B7E8 117 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 IGHV3-74A0A0B4J1X5 117 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 WI2-2373I1.2A0A1W2PRP0 233 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 HELTA6NFD8 242 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 OR4C46A6NHA9 309 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 DNASE2O00115 360 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-208ENST00000444533 EDN2P20800 178 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 RPL12P30050 165 aaKnown RBP10.65□□□□□ -0.7
SSBP3-208ENST00000444533 AP2S1P53680 142 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-208ENST00000444533 TCF24Q7RTU0 167 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 TMEM61Q8N0U2 210 aa10.65□□□□□ -0.7
SSBP3-208ENST00000444533 WDR89Q96FK6 387 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-208ENST00000444533 IGKV1OR2-108A0A075B7D4 117 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 IGHV3-66A0A0C4DH42 116 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 UBE2L5PA0A1B0GUS4 154 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 TSPAN4O14817 238 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 MPDU1O75352 247 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 DFFBO76075 338 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 ORM2P19652 201 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-208ENST00000444533 CD81P60033 236 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 ARL16Q0P5N6 197 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 USF2Q15853 346 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-208ENST00000444533 PXDC1Q5TGL8 231 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 Q6ZRG5 221 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 ZNF709Q8N972 641 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 INO80EQ8NBZ0 244 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-208ENST00000444533 OR5C1Q8NGR4 320 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 OR1B1Q8NGR6 318 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 ST8SIA2Q92186 375 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 RNF2Q99496 336 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 VSIRQ9H7M9 311 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 FBXL17Q9UF56 701 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 SLC45A2Q9UMX9 530 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 SMAD5-AS1Q9Y6J3 95 aa10.64□□□□□ -0.71
SSBP3-208ENST00000444533 IZUMO1RA6ND01 250 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 H0YIZ8 118 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 AGPAT2O15120 278 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 HYPMO75409 117 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 IFNA5P01569 189 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 LINC00869P0C866 280 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 FGF7P21781 194 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 CAMLGP49069 296 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 NHLH2Q02577 135 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 CLINT1Q14677 625 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 OR2T35Q8NGX2 323 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 RNF126Q9BV68 326 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 TUBA4BQ9H853 241 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 KCNIP2Q9NS61 270 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 SELENOKQ9Y6D0 94 aa10.63□□□□□ -0.71
SSBP3-208ENST00000444533 SORL1Q92673 2214 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms