RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 PRR33A8MZF0 331 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 REG1BP48304 166 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 FAM167A-AS1Q96KT0 104 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 HARBI1Q96MB7 349 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 AMMECR1Q9Y4X0 333 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-218ENST00000442625 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 hDV102S1A0JD36 115 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 HIGD1CA8MV81 97 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 C8orf88P0DMB2 117 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 CGB3P0DN86 165 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 CGB7P0DN87 165 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 KLHDC1Q8N7A1 406 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 FAM216BQ8N7L0 139 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 OR4F17Q8NGA8 305 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 ZC2HC1AQ96GY0 325 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 URB1-AS1Q96HZ7 61 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 CCL13Q99616 98 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 DKK4Q9UBT3 224 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 SLC25A15Q9Y619 301 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 MZT1Q08AG7 82 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 C10orf55Q5SWW7 151 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 C19orf35Q6ZS72 473 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 BLNKQ8WV28 456 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 BET1LQ9NYM9 111 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 ZZEF1O43149 2961 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 CACNA1GO43497 2377 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 C2orf70A6NJV1 201 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 ZNF138P52744 262 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 RUSC1-AS1Q66K80 236 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 RPRMLQ8N4K4 120 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 SELENOKQ9Y6D0 94 aa11.43□□□□□ -0.58
MCF2L-218ENST00000442625 TRAV9-2A0A087WT02 112 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 IGHV2-26A0A0B4J1V2 119 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 CA7P43166 264 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 ZNF137PP52743 207 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 MPV17L2Q567V2 206 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 Q71RC1 249 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-218ENST00000442625 LOXL4Q96JB6 756 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 PMCHL2Q9BQD1 86 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 MRPL36Q9P0J6 103 aaKnown RBP11.42□□□□□ -0.58
MCF2L-218ENST00000442625 DSCAML1Q8TD84 2053 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 LHBP01229 141 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 SAA1P0DJI8 122 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-218ENST00000442625 CT45A6P0DMU7 189 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 CT45A5P0DMU8 189 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 CT45A7P0DMV0 189 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
MCF2L-218ENST00000442625 UBE2G1P62253 170 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 LINC00322Q6ZN03 302 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-218ENST00000442625 SEM1Q6ZVN7 128 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 SARAFQ96BY9 339 aa11.42□□□□□ -0.58
MCF2L-218ENST00000442625 TRAV25A0A0B4J276 109 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 REG1AP05451 166 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 APELAP0DMC3 54 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 TAS2R45P59539 299 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 TBR1Q16650 682 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 OR8B3Q8NGG8 313 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 ARL2-SNX15V9GYD0 113 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 A0A1W2PRE2 83 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 IGLC7A0M8Q6 106 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 UPK2O00526 184 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 VAMP3Q15836 100 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 COX19Q49B96 90 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 PLA2G2CQ5R387 149 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 PATE2Q6UY27 113 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 MBD6Q96DN6 1003 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 SS18L2Q9UHA2 77 aa11.41□□□□□ -0.58
MCF2L-218ENST00000442625 ZNF318Q5VUA4 2279 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 BDP1A6H8Y1 2624 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 IGHV3-21A0A0B4J1V1 117 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 H0YJW9 148 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 SNAI2O43623 268 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 TSPAN13O95857 204 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 ZNF562Q6V9R5 426 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 ZNF329Q86UD4 541 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 ASCL2Q99929 193 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 PRNDQ9UKY0 176 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 MSRB2Q9Y3D2 182 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 PEX7O00628 323 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 CFHR2P36980 270 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 PAX2Q02962 417 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 FOXE3Q13461 319 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 DEFB123Q8N688 67 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 NPIPB3Q92617 1050 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 PAXXQ9BUH6 204 aa11.4□□□□□ -0.58
MCF2L-218ENST00000442625 FNDC4Q9H6D8 234 aaPredicted RBP11.4□□□□□ -0.58
MCF2L-218ENST00000442625 MRPS16Q9Y3D3 137 aaKnown RBP11.4□□□□□ -0.58
MCF2L-218ENST00000442625 PSMB11A5LHX3 300 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 TOX4O94842 621 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 CD69Q07108 199 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 CCDC144NLQ6NUI1 221 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 ZNF474Q6S9Z5 364 aaPredicted RBP11.39□□□□□ -0.59
MCF2L-218ENST00000442625 C22orf34Q6ZV56 151 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 GEMIN7Q9H840 131 aaKnown RBP11.39□□□□□ -0.59
MCF2L-218ENST00000442625 MRPL27Q9P0M9 148 aaKnown RBP11.39□□□□□ -0.59
MCF2L-218ENST00000442625 PKDREJQ9NTG1 2253 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 OR4C46A6NHA9 309 aa11.39□□□□□ -0.59
MCF2L-218ENST00000442625 COX7A2P2O60397 106 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms