RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CHRNA7P36544 502 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 SULT1A1P50225 295 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 CAV2P51636 162 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 CRIP2P52943 208 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 RPL23AP62750 156 aaKnown RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 DEFA5Q01523 94 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 IFITM2Q01629 132 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 OR2F1Q13607 317 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF345Q14585 488 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 OPCMLQ14982 345 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 TMEM95Q3KNT9 176 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 C2orf83Q53S99 150 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 CTRB2Q6GPI1 263 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 OR8G2PQ6IF36 304 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 ACOT7LQ6ZUV0 252 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 C16orf82Q7Z2V1 217 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 STPG2Q8N412 459 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 RPP25LQ8N5L8 163 aaKnown RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 LFNGQ8NES3 379 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 CIB3Q96Q77 187 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 SMIM3Q9BZL3 60 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 FNDC4Q9H6D8 234 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 HEYLQ9NQ87 328 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 PARP11Q9NR21 331 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 MRPL36Q9P0J6 103 aaKnown RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 LINC00527Q9UJ94 153 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 PAIP2BQ9ULR5 123 aaKnown RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 RFNGQ9Y644 331 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 A0A0D9SG52 128 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 NPIPB5A8MRT5 1133 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 BCL2L11O43521 198 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 ACTL6BO94805 426 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 IFNA10P01566 189 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 IGHG2P01859 326 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 CRYGCP07315 174 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 S100A11P31949 105 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 HTR2BP41595 481 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 INSL3P51460 131 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 BAXQ07812 192 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 CLINT1Q14677 625 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 VWC2Q2TAL6 325 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 KLK9Q2XQG4 91 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 RPL7L1Q6DKI1 246 aaKnown RBP3.64□□□□□ -1.83
PTPN4-206ENST00000441089 UNQ5815/PRO19632Q6UWF5 114 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 TTC9CQ8N5M4 171 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 TMEM217Q8N7C4 229 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 Q8N9P0 234 aaPredicted RBP3.64□□□□□ -1.83
PTPN4-206ENST00000441089 INO80EQ8NBZ0 244 aaPredicted RBP3.64□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF114Q8NC26 417 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 OR5T1Q8NG75 326 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 OR5C1Q8NGR4 320 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 ABHD5Q8WTS1 349 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 NOL4LQ96MY1 436 aaPredicted RBP3.64□□□□□ -1.83
PTPN4-206ENST00000441089 ARPC5LQ9BPX5 153 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 SRSF8Q9BRL6 282 aaKnown RBP3.64□□□□□ -1.83
PTPN4-206ENST00000441089 SLC25A31Q9H0C2 315 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 ARL6Q9H0F7 186 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 HIPK2Q9H2X6 1198 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 ENY2Q9NPA8 101 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 CACFD1Q9UGQ2 172 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 KLK9Q9UKQ9 250 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 STRAPQ9Y3F4 350 aaKnown RBP3.64□□□□□ -1.83
PTPN4-206ENST00000441089 F11RQ9Y624 299 aaKnown RBP3.64□□□□□ -1.83
PTPN4-206ENST00000441089 U3KQ87 197 aa3.64□□□□□ -1.83
PTPN4-206ENST00000441089 IGLV11-55A0A075B6I3 123 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 IGHV3-21A0A0B4J1V1 117 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 SEC14L6B5MCN3 397 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 I3L2K1 104 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 K7EIM0 57 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 M0QZK8 103 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 NDUFB8O95169 186 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 IGHV3-48P01763 117 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 IFNA4P05014 189 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 IGF1P05019 195 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 OR8U8P0C7N1 319 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 PPIFP30405 207 aaKnown RBP3.63□□□□□ -1.83
PTPN4-206ENST00000441089 NUP62P37198 522 aaPredicted RBP3.63□□□□□ -1.83
PTPN4-206ENST00000441089 SNCAP37840 140 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 RPP30P78346 268 aaKnown RBP3.63□□□□□ -1.83
PTPN4-206ENST00000441089 DLK1P80370 383 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 ERHP84090 104 aaKnown RBP3.63□□□□□ -1.83
PTPN4-206ENST00000441089 CFHR3Q02985 330 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 SLC38A11Q08AI6 406 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 ECSCRQ19T08 205 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 CD300EQ496F6 205 aaPredicted RBP3.63□□□□□ -1.83
PTPN4-206ENST00000441089 C9orf152Q5JTZ5 239 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 C10orf99Q6UWK7 81 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 LINC00336Q6ZUF6 198 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 SLC16A13Q7RTY0 426 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 HSD17B13Q7Z5P4 300 aaPredicted RBP3.63□□□□□ -1.83
PTPN4-206ENST00000441089 SLC35E3Q7Z769 313 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 OR10P1Q8NGE3 313 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 OR1S2Q8NGQ3 325 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 OR1P1Q8NH06 330 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 STOML3Q8TAV4 291 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF414Q96IQ9 312 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 ATP5SQ99766 215 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 TMEM147Q9BVK8 224 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 ARV1Q9H2C2 271 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 ZC4H2Q9NQZ6 224 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms