RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 K7EQG2 157 aa14.6□□□□□ -0.07
SHROOM1-204ENST00000440118 SFT2D2O95562 160 aa14.6□□□□□ -0.07
SHROOM1-204ENST00000440118 FABP1P07148 127 aa14.6□□□□□ -0.07
SHROOM1-204ENST00000440118 NUP62P37198 522 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-204ENST00000440118 USF2Q15853 346 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-204ENST00000440118 SRRQ9GZT4 340 aa14.6□□□□□ -0.07
SHROOM1-204ENST00000440118 PFDN2Q9UHV9 154 aa14.6□□□□□ -0.07
SHROOM1-204ENST00000440118 TMED3Q9Y3Q3 217 aa14.6□□□□□ -0.07
SHROOM1-204ENST00000440118 AGRNO00468 2067 aa14.6□□□□□ -0.07
SHROOM1-204ENST00000440118 FAM90A26D6RGX4 464 aa14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 PTTG1O95997 202 aa14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 HOXB5P09067 269 aa14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 PSG1P11464 419 aa14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 RPP30P78346 268 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 Q6ZNX1 250 aa14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 LRTM2Q8N967 370 aa14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 OR51G1Q8NGK1 321 aa14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 OR11H2Q8NH07 326 aa14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 RNF125Q96EQ8 232 aa14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 CIB3Q96Q77 187 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-204ENST00000440118 LINC00854A0A1B0GVQ3 168 aa14.58□□□□□ -0.08
SHROOM1-204ENST00000440118 NAP1L6A6NFF2 107 aa14.58□□□□□ -0.08
SHROOM1-204ENST00000440118 SLC25A6P12236 298 aa14.58□□□□□ -0.08
SHROOM1-204ENST00000440118 GPX4P36969 197 aaPredicted RBP14.58□□□□□ -0.08
SHROOM1-204ENST00000440118 PSMG4Q5JS54 123 aa14.58□□□□□ -0.08
SHROOM1-204ENST00000440118 ACTL10Q5JWF8 245 aa14.58□□□□□ -0.08
SHROOM1-204ENST00000440118 C16orf54Q6UWD8 224 aa14.58□□□□□ -0.08
SHROOM1-204ENST00000440118 GLMPQ8WWB7 406 aa14.58□□□□□ -0.08
SHROOM1-204ENST00000440118 MAGT1Q9H0U3 335 aa14.58□□□□□ -0.08
SHROOM1-204ENST00000440118 CENPXA8MT69 81 aa14.57□□□□□ -0.08
SHROOM1-204ENST00000440118 PFDN1O60925 122 aa14.57□□□□□ -0.08
SHROOM1-204ENST00000440118 UBE2MP61081 183 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-204ENST00000440118 LYZP61626 148 aa14.57□□□□□ -0.08
SHROOM1-204ENST00000440118 SNRPD3P62318 126 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-204ENST00000440118 EWSR1Q01844 656 aaKnown RBP eCLIP14.57□□□□□ -0.08
SHROOM1-204ENST00000440118 SIGLEC15Q6ZMC9 328 aa14.57□□□□□ -0.08
SHROOM1-204ENST00000440118 DCANP1Q8TF63 244 aa14.57□□□□□ -0.08
SHROOM1-204ENST00000440118 U3KQE9 123 aa14.57□□□□□ -0.08
SHROOM1-204ENST00000440118 KNCNA6PVL3 124 aa14.56□□□□□ -0.08
SHROOM1-204ENST00000440118 PITX3O75364 302 aa14.56□□□□□ -0.08
SHROOM1-204ENST00000440118 GAMTQ14353 236 aa14.56□□□□□ -0.08
SHROOM1-204ENST00000440118 MZT2BQ6NZ67 158 aa14.56□□□□□ -0.08
SHROOM1-204ENST00000440118 NRN1Q9NPD7 142 aa14.56□□□□□ -0.08
SHROOM1-204ENST00000440118 KLK5Q9Y337 293 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-204ENST00000440118 WRBO00258 174 aa14.55□□□□□ -0.08
SHROOM1-204ENST00000440118 SYNGR2O43760 224 aa14.55□□□□□ -0.08
SHROOM1-204ENST00000440118 SPP1P10451 314 aa14.55□□□□□ -0.08
SHROOM1-204ENST00000440118 ATF4P18848 351 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-204ENST00000440118 OXA1LQ15070 435 aa14.55□□□□□ -0.08
SHROOM1-204ENST00000440118 GGNBP1Q5YKI7 109 aa14.55□□□□□ -0.08
SHROOM1-204ENST00000440118 MORN3Q6PF18 240 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-204ENST00000440118 COQ8AQ8NI60 647 aa14.55□□□□□ -0.08
SHROOM1-204ENST00000440118 BUB3O43684 328 aa14.54□□□□□ -0.08
SHROOM1-204ENST00000440118 NDUFB6O95139 128 aa14.54□□□□□ -0.08
SHROOM1-204ENST00000440118 ZNF90Q03938 601 aa14.54□□□□□ -0.08
SHROOM1-204ENST00000440118 OR2F1Q13607 317 aa14.54□□□□□ -0.08
SHROOM1-204ENST00000440118 BAK1Q16611 211 aa14.54□□□□□ -0.08
SHROOM1-204ENST00000440118 C4orf46Q504U0 113 aa14.54□□□□□ -0.08
SHROOM1-204ENST00000440118 TMEM41BQ5BJD5 291 aa14.54□□□□□ -0.08
SHROOM1-204ENST00000440118 OR8G2PQ6IF36 304 aa14.54□□□□□ -0.08
SHROOM1-204ENST00000440118 TRPT1Q86TN4 253 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-204ENST00000440118 SNRPGP15A8MWD9 76 aa14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 H3BP45 60 aa14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 IFNA21P01568 189 aa14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 AKR1C1Q04828 323 aa14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 SPANXN5Q5MJ07 72 aa14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 CEMP1Q6PRD7 247 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 C11orf45Q8TAV5 145 aa14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 MFFQ9GZY8 342 aa14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 C11orf68Q9H3H3 251 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 FBXL17Q9UF56 701 aa14.53□□□□□ -0.08
SHROOM1-204ENST00000440118 DNAH1Q9P2D7 4330 aa14.52□□□□□ -0.08
SHROOM1-204ENST00000440118 C9orf170A2RU37 121 aa14.52□□□□□ -0.09
SHROOM1-204ENST00000440118 TRGV9Q99603 122 aa14.52□□□□□ -0.09
SHROOM1-204ENST00000440118 STRAPQ9Y3F4 350 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-204ENST00000440118 ALMS1Q8TCU4 4167 aa14.51□□□□□ -0.09
SHROOM1-204ENST00000440118 IGKV1D-37A0A075B6S9 117 aa14.51□□□□□ -0.09
SHROOM1-204ENST00000440118 DEFB4AO15263 64 aa14.51□□□□□ -0.09
SHROOM1-204ENST00000440118 ADAP1O75689 374 aa14.51□□□□□ -0.09
SHROOM1-204ENST00000440118 LY6G6CO95867 125 aa14.51□□□□□ -0.09
SHROOM1-204ENST00000440118 PHLDA1Q8WV24 401 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-204ENST00000440118 RAB40CQ96S21 281 aa14.51□□□□□ -0.09
SHROOM1-204ENST00000440118 C7orf50Q9BRJ6 194 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-204ENST00000440118 FLVCR2Q9UPI3 526 aa14.51□□□□□ -0.09
SHROOM1-204ENST00000440118 SMCO3A2RU48 225 aa14.5□□□□□ -0.09
SHROOM1-204ENST00000440118 OR4E1P0C645 316 aa14.5□□□□□ -0.09
SHROOM1-204ENST00000440118 C4BPBP20851 252 aa14.5□□□□□ -0.09
SHROOM1-204ENST00000440118 NUTF2P61970 127 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-204ENST00000440118 LINC00476Q8WZB0 136 aa14.5□□□□□ -0.09
SHROOM1-204ENST00000440118 SSSCA1O60232 199 aa14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 SCGB1D2O95969 90 aa14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 IL7P13232 177 aa14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 ANXA7P20073 488 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 ID1P41134 155 aa14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 NKX2-1P43699 371 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 NANOS2P60321 138 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 ASAH1Q13510 395 aa14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 OR8I2Q8N0Y5 310 aa14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 LINC00052Q96N35 136 aa14.49□□□□□ -0.09
SHROOM1-204ENST00000440118 SEPSECSQ9HD40 501 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms