RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PRR20AP86496 221 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 RPEL1Q2QD12 228 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 C8orf86Q6ZUL3 223 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 S100A7AQ86SG5 101 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 OR4F17Q8NGA8 305 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 OR51G1Q8NGK1 321 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 OR2G3Q8NGZ4 309 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 OR4F4Q96R69 305 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 GINS3Q9BRX5 216 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 ZNF471Q9BX82 626 aaPredicted RBP9.75□□□□□ -0.85
SCLT1-202ENST00000439369 ATRQ13535 2644 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 IGHV4OR15-8A0A075B7B6 117 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 A0A087WW49 117 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 A0A1W2PRX2 142 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 PSG1P11464 419 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 S100A7P31151 101 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 HOXD3P31249 432 aaPredicted RBP9.74□□□□□ -0.85
SCLT1-202ENST00000439369 ELLP55199 621 aaPredicted RBP9.74□□□□□ -0.85
SCLT1-202ENST00000439369 PLP1P60201 277 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 SERF2P84101 59 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 ZNF90Q03938 601 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 EIF5AL1Q6IS14 154 aaKnown RBP9.74□□□□□ -0.85
SCLT1-202ENST00000439369 C18orf65Q6ZTR6 163 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 REC114Q7Z4M0 266 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 C1QL4Q86Z23 238 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 BAP18Q8IXM2 172 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 OR11H1Q8NG94 326 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 RAX2Q96IS3 184 aa9.74□□□□□ -0.85
SCLT1-202ENST00000439369 WI2-2373I1.2A0A1W2PRP0 233 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 A8MWP6 167 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 K7EMT4 169 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 TSPAN15O95858 294 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 LINC00869P0C866 280 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 ATP6V0CP27449 155 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 KLF5Q13887 457 aaPredicted RBP9.73□□□□□ -0.85
SCLT1-202ENST00000439369 NSUN5P1Q3KNT7 163 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 STPG3Q8N7X2 389 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 HSD17B11Q8NBQ5 300 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 PHYHIPLQ96FC7 376 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 ZNF414Q96IQ9 312 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 SLC39A9Q9NUM3 307 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 PFDN2Q9UHV9 154 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 RNF24Q9Y225 148 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 UFC1Q9Y3C8 167 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 PUS1Q9Y606 427 aaKnown RBP eCLIP9.73□□□□□ -0.85
SCLT1-202ENST00000439369 PXMP4Q9Y6I8 212 aa9.73□□□□□ -0.85
SCLT1-202ENST00000439369 ELOA3CA0A087WX78 387 aaPredicted RBP9.72□□□□□ -0.85
SCLT1-202ENST00000439369 M0QZ24 198 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 MBP02144 154 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 SPP1P10451 314 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 B2MP61769 119 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 DEFB136Q30KP8 78 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 TOMM20LQ6UXN7 152 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 Q6ZRG5 221 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 OR1L4Q8NGR5 311 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 RNF125Q96EQ8 232 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 PFDN5Q99471 154 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 RSG1Q9BU20 258 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 ZFAND3Q9H8U3 227 aa9.72□□□□□ -0.85
SCLT1-202ENST00000439369 YIF1AO95070 293 aa9.71□□□□□ -0.86
SCLT1-202ENST00000439369 IL4P05112 153 aa9.71□□□□□ -0.86
SCLT1-202ENST00000439369 MIC13Q5XKP0 118 aa9.71□□□□□ -0.86
SCLT1-202ENST00000439369 ST8SIA2Q92186 375 aa9.71□□□□□ -0.86
SCLT1-202ENST00000439369 MARC2Q969Z3 335 aa9.71□□□□□ -0.86
SCLT1-202ENST00000439369 RNF2Q99496 336 aa9.71□□□□□ -0.86
SCLT1-202ENST00000439369 DAZ1Q9NQZ3 744 aaKnown RBP9.71□□□□□ -0.86
SCLT1-202ENST00000439369 PEMTQ9UBM1 199 aa9.71□□□□□ -0.86
SCLT1-202ENST00000439369 UMAD1C9J7I0 102 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 HYPMO75409 117 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 PF4P02776 101 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 BMI1P35226 326 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 ACOT6Q3I5F7 207 aaPredicted RBP9.7□□□□□ -0.86
SCLT1-202ENST00000439369 FFAR4Q5NUL3 377 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 TMEM182Q6ZP80 229 aaPredicted RBP9.7□□□□□ -0.86
SCLT1-202ENST00000439369 GATAD1Q8WUU5 269 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 METTL26Q96S19 204 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 MDFIQ99750 246 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 DNAJC4Q9NNZ3 241 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 MRPL27Q9P0M9 148 aaKnown RBP9.7□□□□□ -0.86
SCLT1-202ENST00000439369 RABAC1Q9UI14 185 aa9.7□□□□□ -0.86
SCLT1-202ENST00000439369 IGHV3-35A0A0C4DH35 117 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 ZNF320A2RRD8 509 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 COX7A2P2O60397 106 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 M6PRP20645 277 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 NPPCP23582 126 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 GATA2P23769 480 aaPredicted RBP9.69□□□□□ -0.86
SCLT1-202ENST00000439369 CRYBB3P26998 211 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 SLURP1P55000 103 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 SYNJ2BPP57105 145 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 LYZP61626 148 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 USF2Q15853 346 aaPredicted RBP9.69□□□□□ -0.86
SCLT1-202ENST00000439369 HIST2H2BDQ6DRA6 164 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 UNQ9165/PRO28630Q6UXU0 137 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 OR9G4Q8NGQ1 327 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 RCC1LQ96I51 464 aaKnown RBP9.69□□□□□ -0.86
SCLT1-202ENST00000439369 NARS2Q96I59 477 aaKnown RBP9.69□□□□□ -0.86
SCLT1-202ENST00000439369 SH3BGRL3Q9H299 93 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 SLC25A32Q9H2D1 315 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms