RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 A0A0G2JRQ6 117 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 FAM90A26D6RGX4 464 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 GABARAPH6UMI1 98 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 GABARAPO95166 117 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 CD74P04233 296 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 IGLC1P0CG04 106 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 RBMY1A1P0DJD3 496 aaKnown RBP5.63□□□□□ -1.51
VPS50-204ENST00000438395 RBMY1CP0DJD4 496 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 SULT1A3P0DMM9 295 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 SULT1A4P0DMN0 295 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 C4BPBP20851 252 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 ID1P41134 155 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 YPEL3P61236 119 aaPredicted RBP5.63□□□□□ -1.51
VPS50-204ENST00000438395 SSBP1Q04837 148 aaKnown RBP5.63□□□□□ -1.51
VPS50-204ENST00000438395 RBMY1FQ15415 496 aaKnown RBP5.63□□□□□ -1.51
VPS50-204ENST00000438395 BSXQ3C1V8 233 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 PVRIGQ6DKI7 326 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 PRSS54Q6PEW0 395 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 SIGLEC15Q6ZMC9 328 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 OR4D10Q8NGI6 311 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 OR52E5Q8NH55 327 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 COQ8AQ8NI60 647 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 DCANP1Q8TF63 244 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 PPP1R14BQ96C90 147 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 SCGB3A2Q96PL1 93 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 RAB40CQ96S21 281 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 PRRT1Q99946 306 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 RNF126Q9BV68 326 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 PBDC1Q9BVG4 233 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 NAA60Q9H7X0 242 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 MRPL36Q9P0J6 103 aaKnown RBP5.63□□□□□ -1.51
VPS50-204ENST00000438395 XCL2Q9UBD3 114 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 KCNIP3Q9Y2W7 256 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 HERC2O95714 4834 aa5.63□□□□□ -1.51
VPS50-204ENST00000438395 DEFB131BA0A096LNP1 70 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 PIGBOS1A0A0B4J2F0 54 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 TEX48A0A1B0GUV7 120 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 ZFP92A6NM28 416 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 ZNF705EA8MWA4 302 aaPredicted RBP5.62□□□□□ -1.51
VPS50-204ENST00000438395 NXPH3O95157 252 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 CDS2O95674 445 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 AKAIN1P0CW23 69 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 P0DMU3 169 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 FAM231AP0DMU4 169 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 FAM231CP0DMU5 169 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 EMP1P54849 157 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 SRPXP78539 464 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 IL18Q14116 193 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 AARDQ4LEZ3 155 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 C2orf83Q53S99 150 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 FAAP20Q6NZ36 180 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 C16orf54Q6UWD8 224 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 LINC00336Q6ZUF6 198 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 UBE2DNLQ8IWF7 75 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 GLMPQ8WWB7 406 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 NPIPB3Q92617 1050 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 SLC35E1Q96K37 410 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 NDUFAF3Q9BU61 184 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 SCP2D1Q9UJQ7 156 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 APLNQ9ULZ1 77 aa5.62□□□□□ -1.51
VPS50-204ENST00000438395 IGHV3OR16-12A0A075B7B8 117 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 TMEM189A5PLL7 270 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 CRYM-AS1A6NIL9 109 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 NOL3O60936 208 aaKnown RBP5.61□□□□□ -1.51
VPS50-204ENST00000438395 TOMM40O96008 361 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 AMBPP02760 352 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
VPS50-204ENST00000438395 ANXA3P12429 323 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 KLF9Q13886 244 aaPredicted RBP5.61□□□□□ -1.51
VPS50-204ENST00000438395 USF2Q15853 346 aaPredicted RBP5.61□□□□□ -1.51
VPS50-204ENST00000438395 SAMD13Q5VXD3 122 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 OR8G2PQ6IF36 304 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 Q6ZRM9 215 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 GPR141Q7Z602 305 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 CLVS1Q8IUQ0 354 aaPredicted RBP5.61□□□□□ -1.51
VPS50-204ENST00000438395 SELENOHQ8IZQ5 122 aaKnown RBP5.61□□□□□ -1.51
VPS50-204ENST00000438395 LGI3Q8N145 548 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 OR51G1Q8NGK1 321 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 DTD1Q8TEA8 209 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 GLYATL2Q8WU03 294 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 SMIM4Q8WVI0 70 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 IL22RA2Q969J5 263 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 RNF125Q96EQ8 232 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 LINC00052Q96N35 136 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 SEPSECSQ9HD40 501 aaKnown RBP5.61□□□□□ -1.51
VPS50-204ENST00000438395 MCUBQ9NWR8 336 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 RABL2AQ9UBK7 228 aaPredicted RBP5.61□□□□□ -1.51
VPS50-204ENST00000438395 PAIP2BQ9ULR5 123 aaKnown RBP5.61□□□□□ -1.51
VPS50-204ENST00000438395 RABL2BQ9UNT1 228 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 U3KQ87 197 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 X6R8D5 127 aa5.61□□□□□ -1.51
VPS50-204ENST00000438395 H3BMM0 161 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 IFNA21P01568 189 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 IGKV3-20P01619 116 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 SPART-AS1P0CW21 52 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 PSG1P11464 419 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 HLA-DRB4P13762 266 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 AKR1C4P17516 323 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 NKX2-1P43699 371 aaPredicted RBP5.6□□□□□ -1.51
VPS50-204ENST00000438395 CCR6P51684 374 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms