RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 HILPDAQ9Y5L2 63 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 TRAPPC1Q9Y5R8 145 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 ZNF705FA8MVS1 300 aaPredicted RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 ZNF705DP0CH99 300 aaPredicted RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 ZNF705BP0CI00 300 aaPredicted RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 ARF6P62330 175 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 ERHP84090 104 aaKnown RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 TNXAQ16473 311 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 RAB1CQ92928 201 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 TXN2Q99757 166 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 FAM103A1Q9BTL3 118 aaKnown RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 SSBP3Q9BWW4 388 aaPredicted RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 UBTD1Q9HAC8 227 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 FKBP11Q9NYL4 201 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 POLR3KQ9Y2Y1 108 aaPredicted RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 FLNBO75369 2602 aaKnown RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 MDFIC2A0A1B0GVS7 189 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 HELTA6NFD8 242 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 GGTLC3B5MD39 225 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 TNFRSF13BO14836 293 aaPredicted RBP7.6□□□□□ -1.19
CUX1-206ENST00000437600 RANP62826 216 aaKnown RBP7.6□□□□□ -1.19
CUX1-206ENST00000437600 CD69Q07108 199 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 HIST2H2BCQ6DN03 193 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 OR1L8Q8NGR8 309 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 ASCL2Q99929 193 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 SLC25A33Q9BSK2 321 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 SERTAD4Q9NUC0 356 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 A0A1W2PPI3 338 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 IGLV2-23P01705 113 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 LDLRAD2Q5SZI1 272 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 SSX8Q7RTT4 187 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 PNKDQ8N490 385 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 OR10G8Q8NGN5 311 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 NRGNQ92686 78 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 ST6GALNAC6Q969X2 333 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 ANAPC16Q96DE5 110 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 FBXL15Q9H469 300 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 LINC00574Q9H8X3 128 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 RAB9BQ9NP90 201 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 PPOXP50336 477 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 MFAP2P55001 183 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 C1orf194Q5T5A4 169 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 CSPG4Q6UVK1 2322 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 PATE2Q6UY27 113 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 OR5AU1Q8NGC0 362 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 OSR1Q8TAX0 266 aaPredicted RBP7.6□□□□□ -1.19
CUX1-206ENST00000437600 FAM168AQ92567 244 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 PYGO2Q9BRQ0 406 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 BET1LQ9NYM9 111 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 INSIG2Q9Y5U4 225 aa7.6□□□□□ -1.19
CUX1-206ENST00000437600 UNC79Q9P2D8 2635 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 F2Z2F3 143 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 IER3P46695 156 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 GNG5P63218 68 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 MEF2CQ06413 473 aaPredicted RBP7.59□□□□□ -1.19
CUX1-206ENST00000437600 POU2AF1Q16633 256 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 CENPWQ5EE01 88 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 KLF17Q5JT82 389 aaPredicted RBP7.59□□□□□ -1.19
CUX1-206ENST00000437600 COA6Q5JTJ3 125 aaKnown RBP7.59□□□□□ -1.19
CUX1-206ENST00000437600 PRR27Q6MZM9 219 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 OR8I2Q8N0Y5 310 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 OR5B3Q8NH48 314 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 ONECUT1Q9UBC0 465 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 ZNF257Q9Y2Q1 563 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 TMEM155Q4W5P6 130 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 FBLN7Q53RD9 439 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 C2orf83Q53S99 150 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 OR1B1Q8NGR6 318 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 EAF1Q96JC9 268 aaPredicted RBP7.59□□□□□ -1.19
CUX1-206ENST00000437600 LPAR2Q9HBW0 351 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 ZNF355PQ9NSJ1 428 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 NAGKQ9UJ70 344 aa7.59□□□□□ -1.19
CUX1-206ENST00000437600 IGHV2-26A0A0B4J1V2 119 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 GGCTO75223 188 aaKnown RBP7.58□□□□□ -1.2
CUX1-206ENST00000437600 VENTXO95231 258 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 PRRX1P54821 245 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 DLX6P56179 175 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 KLRD1Q13241 179 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 MRGPRG-AS1Q2M3A8 158 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 KCNIP4Q6PIL6 250 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 ZNF841Q6ZN19 808 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 TBX15Q96SF7 602 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 TMEM133Q9H2Q1 129 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 DNAJC4Q9NNZ3 241 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 WASHC3Q9Y3C0 194 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 TEX15Q9BXT5 2789 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 PPIAL4CA0A0B4J2A2 164 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 KIR2DL5BA0A0G2JN68 375 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 KIR2DL5BA0A0G2JPC4 375 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 PPIAL4GP0DN37 164 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 ADMP35318 185 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 TFPI2P48307 235 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 GNG4P50150 75 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 TMEM177Q53S58 311 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 KIR2DL5AQ8N109 375 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 TMEM186Q96B77 213 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 RAB1BQ9H0U4 201 aa7.58□□□□□ -1.2
CUX1-206ENST00000437600 USF1P22415 310 aaPredicted RBP7.57□□□□□ -1.2
CUX1-206ENST00000437600 UBE2L3P68036 154 aaKnown RBP7.57□□□□□ -1.2
CUX1-206ENST00000437600 PLGLAQ15195 96 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms