RNA–Protein interactions for RNA: ENST00000437413.2

SMG1P3-202, Transcript of SMG1 pseudogene 3, humanhuman

TSL 4

Gene SMG1P3, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-202ENST00000437413 CCNKO75909 580 aa16.55■□□□□ 0.24
SMG1P3-202ENST00000437413 IL4P05112 153 aa16.55■□□□□ 0.24
SMG1P3-202ENST00000437413 NUP62P37198 522 aaPredicted RBP16.55■□□□□ 0.24
SMG1P3-202ENST00000437413 SLC38A11Q08AI6 406 aa16.55■□□□□ 0.24
SMG1P3-202ENST00000437413 RBPMS2Q6ZRY4 209 aaKnown RBP16.55■□□□□ 0.24
SMG1P3-202ENST00000437413 RHPN1-AS1Q9BWJ2 59 aa16.55■□□□□ 0.24
SMG1P3-202ENST00000437413 VSIRQ9H7M9 311 aa16.55■□□□□ 0.24
SMG1P3-202ENST00000437413 WI2-2373I1.2A0A1W2PRP0 233 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 CXCL3P19876 107 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 SELENOTP62341 195 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 BAXQ07812 192 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 FCN2Q15485 313 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 ATP6V1FQ16864 119 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 TEPPQ6URK8 271 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 OR11H7Q8NGC8 314 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 RNF125Q96EQ8 232 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 MEGF8Q7Z7M0 2845 aa16.54■□□□□ 0.24
SMG1P3-202ENST00000437413 TSPAN4O14817 238 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 HNRNPCP07910 306 aaKnown RBP eCLIP16.53■□□□□ 0.246e-8■■■□□ 15.4
SMG1P3-202ENST00000437413 ZNF90Q03938 601 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 FGL1Q08830 312 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 ARL16Q0P5N6 197 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 GTSCR1Q86UQ5 136 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 TMEM61Q8N0U2 210 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 BPIFCQ8NFQ6 507 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 GRAMD2BQ96HH9 432 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 PRR25Q96S07 402 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 OR5AC2Q9NZP5 309 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 RABAC1Q9UI14 185 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 SORL1Q92673 2214 aa16.53■□□□□ 0.24
SMG1P3-202ENST00000437413 IGSF23A1L1A6 192 aa16.52■□□□□ 0.24
SMG1P3-202ENST00000437413 H0YIZ8 118 aa16.52■□□□□ 0.24
SMG1P3-202ENST00000437413 CST7O76096 145 aa16.52■□□□□ 0.24
SMG1P3-202ENST00000437413 PRB2P02812 416 aaPredicted RBP16.52■□□□□ 0.24
SMG1P3-202ENST00000437413 GIPP09681 153 aaPredicted RBP16.52■□□□□ 0.24
SMG1P3-202ENST00000437413 S100A7P31151 101 aa16.52■□□□□ 0.24
SMG1P3-202ENST00000437413 LILRB2Q8N423 598 aa16.52■□□□□ 0.24
SMG1P3-202ENST00000437413 MRAPQ8TCY5 172 aa16.52■□□□□ 0.24
SMG1P3-202ENST00000437413 SPAG8Q99932 426 aaPredicted RBP16.52■□□□□ 0.24
SMG1P3-202ENST00000437413 IZUMO1RA6ND01 250 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 ZNF785A8K8V0 405 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 K7EIL1 84 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 LYL1P12980 280 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 VWC2Q2TAL6 325 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 TMEM217Q8N7C4 229 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 THAP6Q8TBB0 222 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 RNF126Q9BV68 326 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 TMEM147Q9BVK8 224 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 UQCC1Q9NVA1 299 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 SLC45A2Q9UMX9 530 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 LSM4Q9Y4Z0 139 aaKnown RBP16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 U3KQE9 123 aa16.51■□□□□ 0.23
SMG1P3-202ENST00000437413 EIF2B2P49770 351 aaKnown RBP16.5■□□□□ 0.23
SMG1P3-202ENST00000437413 RAP2BP61225 183 aa16.5■□□□□ 0.23
SMG1P3-202ENST00000437413 RAB31Q13636 194 aa16.5■□□□□ 0.23
SMG1P3-202ENST00000437413 USF2Q15853 346 aaPredicted RBP16.5■□□□□ 0.23
SMG1P3-202ENST00000437413 GUCA2BQ16661 112 aa16.5■□□□□ 0.23
SMG1P3-202ENST00000437413 CYP2G1PQ6ZSU1 146 aa16.5■□□□□ 0.23
SMG1P3-202ENST00000437413 WDR89Q96FK6 387 aaPredicted RBP16.5■□□□□ 0.23
SMG1P3-202ENST00000437413 RNF2Q99496 336 aa16.5■□□□□ 0.23
SMG1P3-202ENST00000437413 EWSR1Q01844 656 aaKnown RBP eCLIP16.49■□□□□ 0.237e-7■■■□□ 16.3
SMG1P3-202ENST00000437413 S100A7AQ86SG5 101 aa16.49■□□□□ 0.23
SMG1P3-202ENST00000437413 ST8SIA2Q92186 375 aa16.49■□□□□ 0.23
SMG1P3-202ENST00000437413 LYZP61626 148 aa16.48■□□□□ 0.23
SMG1P3-202ENST00000437413 PAFAH1B2P68402 229 aa16.48■□□□□ 0.23
SMG1P3-202ENST00000437413 PXDC1Q5TGL8 231 aa16.48■□□□□ 0.23
SMG1P3-202ENST00000437413 FAM90A2PQ658T7 463 aa16.48■□□□□ 0.23
SMG1P3-202ENST00000437413 ZNF546Q86UE3 836 aa16.48■□□□□ 0.23
SMG1P3-202ENST00000437413 PBDC1Q9BVG4 233 aa16.48■□□□□ 0.23
SMG1P3-202ENST00000437413 MBD2Q9UBB5 411 aa16.48■□□□□ 0.23
SMG1P3-202ENST00000437413 SMAD5-AS1Q9Y6J3 95 aa16.48■□□□□ 0.23
SMG1P3-202ENST00000437413 IGHV3-49A0A0A0MS15 119 aa16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 HELTA6NFD8 242 aa16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 OR4C46A6NHA9 309 aa16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 MPDU1O75352 247 aa16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 APOHP02749 345 aaPredicted RBP16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 AP2S1P53680 142 aaPredicted RBP16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 PLP1P60201 277 aa16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 OR2F1Q13607 317 aa16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 TCF24Q7RTU0 167 aa16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 WDR83OSQ9Y284 106 aa16.47■□□□□ 0.23
SMG1P3-202ENST00000437413 TRAV2A0A0B4J234 112 aa16.46■□□□□ 0.23
SMG1P3-202ENST00000437413 BUB3O43684 328 aa16.46■□□□□ 0.23
SMG1P3-202ENST00000437413 RPL12P30050 165 aaKnown RBP16.46■□□□□ 0.23
SMG1P3-202ENST00000437413 NHLH2Q02577 135 aa16.46■□□□□ 0.23
SMG1P3-202ENST00000437413 C1orf194Q5T5A4 169 aa16.46■□□□□ 0.23
SMG1P3-202ENST00000437413 C16orf54Q6UWD8 224 aa16.46■□□□□ 0.23
SMG1P3-202ENST00000437413 OR5C1Q8NGR4 320 aa16.46■□□□□ 0.23
SMG1P3-202ENST00000437413 CHAC2Q8WUX2 184 aa16.46■□□□□ 0.23
SMG1P3-202ENST00000437413 RNF24Q9Y225 148 aa16.46■□□□□ 0.23
SMG1P3-202ENST00000437413 IGHV3OR16-13A0A075B7E8 117 aa16.45■□□□□ 0.22
SMG1P3-202ENST00000437413 IGHV3-74A0A0B4J1X5 117 aa16.45■□□□□ 0.22
SMG1P3-202ENST00000437413 AGPAT2O15120 278 aa16.45■□□□□ 0.22
SMG1P3-202ENST00000437413 CMC4P56277 68 aaPredicted RBP16.45■□□□□ 0.22
SMG1P3-202ENST00000437413 DEFB121Q5J5C9 76 aa16.45■□□□□ 0.22
SMG1P3-202ENST00000437413 Q8N1Y9 231 aa16.45■□□□□ 0.22
SMG1P3-202ENST00000437413 FAM110AQ9BQ89 295 aa16.45■□□□□ 0.22
SMG1P3-202ENST00000437413 NEURL2Q9BR09 285 aa16.45■□□□□ 0.22
SMG1P3-202ENST00000437413 FBXL17Q9UF56 701 aa16.45■□□□□ 0.22
SMG1P3-202ENST00000437413 HSPB11Q9Y547 144 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms