RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 TMEM218A2RU14 115 aa16.53■□□□□ 0.24
YBX1-203ENST00000436427 NUPL2O15504 423 aaKnown RBP16.53■□□□□ 0.24
YBX1-203ENST00000436427 HBE1P02100 147 aa16.53■□□□□ 0.24
YBX1-203ENST00000436427 ZNF343Q6P1L6 599 aa16.53■□□□□ 0.24
YBX1-203ENST00000436427 UBE2E2Q96LR5 201 aa16.53■□□□□ 0.24
YBX1-203ENST00000436427 C2CD3Q4AC94 2353 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.52■□□□□ 0.24
YBX1-203ENST00000436427 PPP5D1E7EU14 171 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 TGOLN2O43493 480 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 IGKV1-17P01599 117 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 CTSGP08311 255 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 CD28P10747 220 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 GATA2P23769 480 aaPredicted RBP16.52■□□□□ 0.24
YBX1-203ENST00000436427 MIC13Q5XKP0 118 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 HIST2H2BDQ6DRA6 164 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 PRIMA1Q86XR5 153 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 ATP6V0BQ99437 205 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 CHRDL1Q9BU40 450 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 KCNIP2Q9NS61 270 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 SLC45A2Q9UMX9 530 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 PXMP4Q9Y6I8 212 aa16.52■□□□□ 0.24
YBX1-203ENST00000436427 JMJD1CQ15652 2540 aa16.52■□□□□ 0.23
YBX1-203ENST00000436427 H2AFB1P0C5Y9 115 aa16.51■□□□□ 0.23
YBX1-203ENST00000436427 ARL3P36405 182 aa16.51■□□□□ 0.23
YBX1-203ENST00000436427 ELLP55199 621 aaPredicted RBP16.51■□□□□ 0.23
YBX1-203ENST00000436427 FOXL1Q12952 345 aa16.51■□□□□ 0.23
YBX1-203ENST00000436427 PEA15Q15121 130 aa16.51■□□□□ 0.23
YBX1-203ENST00000436427 STPG3Q8N7X2 389 aa16.51■□□□□ 0.23
YBX1-203ENST00000436427 TRBV12-3P01733 135 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 FABP1P07148 127 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 ADMP35318 185 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 RPL29P47914 159 aaKnown RBP16.5■□□□□ 0.23
YBX1-203ENST00000436427 B2MP61769 119 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 SELENOTP62341 195 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 APOC3P02656 99 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 LGALS1P09382 135 aaKnown RBP16.5■□□□□ 0.23
YBX1-203ENST00000436427 RD3LP0DJH9 198 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 FHITP49789 147 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 FFAR4Q5NUL3 377 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 SPSB3Q6PJ21 355 aa16.5■□□□□ 0.23
YBX1-203ENST00000436427 PEF1Q9UBV8 284 aaKnown RBP16.5■□□□□ 0.23
YBX1-203ENST00000436427 IGHV3-35A0A0C4DH35 117 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 MBP02144 154 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 PSG1P11464 419 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 CDX1P47902 265 aaPredicted RBP16.49■□□□□ 0.23
YBX1-203ENST00000436427 PRR20EP86478 221 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 PRR20CP86479 221 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 PRR20DP86480 221 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 PRR20BP86481 221 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 PRR20AP86496 221 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 FAM209BQ5JX69 171 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 C18orf65Q6ZTR6 163 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 SLC39A9Q9NUM3 307 aa16.49■□□□□ 0.23
YBX1-203ENST00000436427 F8W036 122 aa16.48■□□□□ 0.23
YBX1-203ENST00000436427 TOMM40O96008 361 aa16.48■□□□□ 0.23
YBX1-203ENST00000436427 LINC00869P0C866 280 aa16.48■□□□□ 0.23
YBX1-203ENST00000436427 YPEL3P61236 119 aaPredicted RBP16.48■□□□□ 0.23
YBX1-203ENST00000436427 KRTAP24-1Q3LI83 254 aa16.48■□□□□ 0.23
YBX1-203ENST00000436427 TMEM41BQ5BJD5 291 aa16.48■□□□□ 0.23
YBX1-203ENST00000436427 KLHL30-AS1Q8NEE0 82 aa16.48■□□□□ 0.23
YBX1-203ENST00000436427 CITED2Q99967 270 aaPredicted RBP16.48■□□□□ 0.23
YBX1-203ENST00000436427 A0A1W2PRX2 142 aa16.47■□□□□ 0.23
YBX1-203ENST00000436427 CD5P06127 495 aa16.47■□□□□ 0.23
YBX1-203ENST00000436427 GUK1Q16774 197 aa16.47■□□□□ 0.23
YBX1-203ENST00000436427 Q8WTZ3 238 aa16.47■□□□□ 0.23
YBX1-203ENST00000436427 C4orf3Q8WVX3 66 aa16.47■□□□□ 0.23
YBX1-203ENST00000436427 SEC11CQ9BY50 192 aa16.47■□□□□ 0.23
YBX1-203ENST00000436427 SMDT1Q9H4I9 107 aa16.47■□□□□ 0.23
YBX1-203ENST00000436427 TMEM231Q9H6L2 316 aa16.47■□□□□ 0.23
YBX1-203ENST00000436427 RELQ04864 619 aaPredicted RBP16.46■□□□□ 0.23
YBX1-203ENST00000436427 ZNF600Q6ZNG1 722 aa16.46■□□□□ 0.23
YBX1-203ENST00000436427 SVBPQ8N300 66 aa16.46■□□□□ 0.23
YBX1-203ENST00000436427 OR51G1Q8NGK1 321 aa16.46■□□□□ 0.23
YBX1-203ENST00000436427 EIF5A2Q9GZV4 153 aaKnown RBP16.46■□□□□ 0.23
YBX1-203ENST00000436427 VSIRQ9H7M9 311 aa16.46■□□□□ 0.23
YBX1-203ENST00000436427 DOK5Q9P104 306 aa16.46■□□□□ 0.23
YBX1-203ENST00000436427 TSSC4Q9Y5U2 329 aaPredicted RBP16.46■□□□□ 0.23
YBX1-203ENST00000436427 BMPR1BO00238 502 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 GGCTO75223 188 aaKnown RBP16.45■□□□□ 0.22
YBX1-203ENST00000436427 YIF1AO95070 293 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 LYZP61626 148 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 AWAT1Q58HT5 328 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 GCSAMLQ5JQS6 135 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 CARHSP1Q9Y2V2 147 aaKnown RBP16.45■□□□□ 0.22
YBX1-203ENST00000436427 PUS1Q9Y606 427 aaKnown RBP eCLIP16.45■□□□□ 0.22
YBX1-203ENST00000436427 SETD2Q9BYW2 2564 aaPredicted RBP16.45■□□□□ 0.22
YBX1-203ENST00000436427 TRAV1-1A0A0B4J248 108 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 OR2C1O95371 312 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 IL4P05112 153 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 ORM2P19652 201 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 KRTAP10-3P60369 221 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 SRSF3P84103 164 aaKnown RBP16.45■□□□□ 0.22
YBX1-203ENST00000436427 DEFB136Q30KP8 78 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 ACOT6Q3I5F7 207 aaPredicted RBP16.45■□□□□ 0.22
YBX1-203ENST00000436427 OR1B1Q8NGR6 318 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 SFT2D1Q8WV19 159 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 WFDC12Q8WWY7 111 aa16.45■□□□□ 0.22
YBX1-203ENST00000436427 SFTA3P0C7M3 94 aa16.44■□□□□ 0.22
YBX1-203ENST00000436427 C10orf91Q5T1B1 145 aa16.44■□□□□ 0.22
YBX1-203ENST00000436427 IGHV4OR15-8A0A075B7B6 117 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms