RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 MSMBP08118 114 aa15.4■□□□□ 0.06
VRK2-205ENST00000432057 SNRPCP09234 159 aaKnown RBP15.4■□□□□ 0.06
VRK2-205ENST00000432057 IGHV4-38-2P0DP08 117 aa15.4■□□□□ 0.06
VRK2-205ENST00000432057 PAX1P15863 534 aa15.4■□□□□ 0.06
VRK2-205ENST00000432057 ANAPC16Q96DE5 110 aa15.4■□□□□ 0.06
VRK2-205ENST00000432057 SH2D7A6NKC9 451 aaPredicted RBP15.39■□□□□ 0.05
VRK2-205ENST00000432057 HIGD1AQ9Y241 93 aa15.39■□□□□ 0.05
VRK2-205ENST00000432057 CELSR1Q9NYQ6 3014 aa15.39■□□□□ 0.05
VRK2-205ENST00000432057 A0A0U1RQK1 487 aa15.38■□□□□ 0.05
VRK2-205ENST00000432057 GALR1P47211 349 aa15.38■□□□□ 0.05
VRK2-205ENST00000432057 DSCR9P59020 149 aa15.38■□□□□ 0.05
VRK2-205ENST00000432057 CLEC12BQ2HXU8 276 aa15.38■□□□□ 0.05
VRK2-205ENST00000432057 LEMD1Q68G75 181 aa15.38■□□□□ 0.05
VRK2-205ENST00000432057 OCC1Q8TAD7 63 aa15.38■□□□□ 0.05
VRK2-205ENST00000432057 FAM210BQ96KR6 192 aa15.38■□□□□ 0.05
VRK2-205ENST00000432057 NDUFB8O95169 186 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 PFN1P07737 140 aaKnown RBP15.37■□□□□ 0.05
VRK2-205ENST00000432057 RD3LP0DJH9 198 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 TMEM219Q86XT9 240 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 C1QL4Q86Z23 238 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 C9JCJ5 164 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 ATP6V0E1O15342 81 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 OR2J3O76001 311 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 GP9P14770 177 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 ECSCRQ19T08 205 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 OR5B12Q96R08 314 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 C7orf69Q9H7B7 122 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 BIN3Q9NQY0 253 aa15.37■□□□□ 0.05
VRK2-205ENST00000432057 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.36■□□□□ 0.052e-9■■■■□ 19.6
VRK2-205ENST00000432057 ZFHX3Q15911 3703 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 MDFIC2A0A1B0GVS7 189 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 K7EN84 100 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 GNG7O60262 68 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 COL8A1P27658 744 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 CENPWQ5EE01 88 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 STXBP6Q8NFX7 210 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 SGMS2Q8NHU3 365 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 BLNKQ8WV28 456 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 SOX21Q9Y651 276 aaPredicted RBP15.36■□□□□ 0.05
VRK2-205ENST00000432057 CENPEQ02224 2701 aa15.36■□□□□ 0.05
VRK2-205ENST00000432057 TRBV24-1A0A075B6N3 115 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 HELTA6NFD8 242 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 F8W735 103 aaPredicted RBP15.35■□□□□ 0.05
VRK2-205ENST00000432057 TOMM40O96008 361 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 IGHV3-23P01764 117 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 FABP1P07148 127 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 CD99P14209 185 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 MFAP4P55083 255 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 SMUG1Q53HV7 270 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 UNQ5815/PRO19632Q6UWF5 114 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 ZNF329Q86UD4 541 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 C5orf56Q8N8D9 126 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 SFRP2Q96HF1 295 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 SLC25A39Q9BZJ4 359 aaPredicted RBP15.35■□□□□ 0.05
VRK2-205ENST00000432057 SLC25A16P16260 332 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 S100PP25815 95 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 Q56UQ5 140 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 FAM110DQ8TAY7 271 aaPredicted RBP15.35■□□□□ 0.05
VRK2-205ENST00000432057 PIFOQ8TCI5 191 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 ZNF48Q96MX3 618 aaPredicted RBP15.35■□□□□ 0.05
VRK2-205ENST00000432057 TMUB1Q9BVT8 246 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 HIF1ANQ9NWT6 349 aa15.35■□□□□ 0.05
VRK2-205ENST00000432057 LINC01548A6NM66 108 aa15.34■□□□□ 0.05
VRK2-205ENST00000432057 B4DSR2 109 aa15.34■□□□□ 0.05
VRK2-205ENST00000432057 GNG4P50150 75 aa15.34■□□□□ 0.05
VRK2-205ENST00000432057 C21orf62Q9NYP8 219 aa15.34■□□□□ 0.05
VRK2-205ENST00000432057 THYN1Q9P016 225 aa15.34■□□□□ 0.05
VRK2-205ENST00000432057 MRPL27Q9P0M9 148 aaKnown RBP15.34■□□□□ 0.05
VRK2-205ENST00000432057 MOB4Q9Y3A3 225 aa15.34■□□□□ 0.05
VRK2-205ENST00000432057 CSMD2Q7Z408 3487 aa15.33■□□□□ 0.05
VRK2-205ENST00000432057 KRTAP10-9P60411 292 aa15.33■□□□□ 0.05
VRK2-205ENST00000432057 TEX38Q6PEX7 206 aa15.33■□□□□ 0.05
VRK2-205ENST00000432057 FBXL7Q9UJT9 491 aa15.33■□□□□ 0.05
VRK2-205ENST00000432057 LY96Q9Y6Y9 160 aa15.33■□□□□ 0.05
VRK2-205ENST00000432057 POLQO75417 2590 aa15.33■□□□□ 0.04
VRK2-205ENST00000432057 TRAV30A0A087WSZ9 112 aa15.33■□□□□ 0.04
VRK2-205ENST00000432057 H3BTX0 84 aa15.33■□□□□ 0.04
VRK2-205ENST00000432057 IL4P05112 153 aa15.33■□□□□ 0.04
VRK2-205ENST00000432057 PLA2G2AP14555 144 aa15.33■□□□□ 0.04
VRK2-205ENST00000432057 SNRPEP62304 92 aaKnown RBP15.33■□□□□ 0.04
VRK2-205ENST00000432057 RANP62826 216 aaKnown RBP15.33■□□□□ 0.04
VRK2-205ENST00000432057 ZNF491Q8N8L2 437 aa15.33■□□□□ 0.04
VRK2-205ENST00000432057 RNF125Q96EQ8 232 aa15.33■□□□□ 0.04
VRK2-205ENST00000432057 PYGO2Q9BRQ0 406 aa15.33■□□□□ 0.04
VRK2-205ENST00000432057 MEGF9Q9H1U4 602 aa15.33■□□□□ 0.04
VRK2-205ENST00000432057 A0A1W2PPQ1 181 aa15.32■□□□□ 0.04
VRK2-205ENST00000432057 PPP1R2P9O14990 202 aa15.32■□□□□ 0.04
VRK2-205ENST00000432057 NBEAP1P0C6P0 100 aa15.32■□□□□ 0.04
VRK2-205ENST00000432057 SRP14P37108 136 aaKnown RBP15.32■□□□□ 0.04
VRK2-205ENST00000432057 MYCNOSP40205 109 aa15.32■□□□□ 0.04
VRK2-205ENST00000432057 IGF2BP2-AS1Q96M15 143 aa15.32■□□□□ 0.04
VRK2-205ENST00000432057 CR1P17927 2039 aa15.32■□□□□ 0.04
VRK2-205ENST00000432057 A0A096LNT2 108 aa15.31■□□□□ 0.04
VRK2-205ENST00000432057 WI2-2373I1.2A0A1W2PRP0 233 aa15.31■□□□□ 0.04
VRK2-205ENST00000432057 G3V318 75 aa15.31■□□□□ 0.04
VRK2-205ENST00000432057 PEX7O00628 323 aa15.31■□□□□ 0.04
VRK2-205ENST00000432057 AVPP01185 164 aa15.31■□□□□ 0.04
VRK2-205ENST00000432057 TRGC2P03986 189 aa15.31■□□□□ 0.04
VRK2-205ENST00000432057 S100A6P06703 90 aa15.31■□□□□ 0.04
VRK2-205ENST00000432057 YPEL3P61236 119 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms