RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 GPR132Q9UNW8 380 aa6.83□□□□□ -1.32
CDC42-IT1-201ENST00000431803 TMEM56-RWDD3S4R434 201 aa6.83□□□□□ -1.32
CDC42-IT1-201ENST00000431803 IGHV4-28A0A0C4DH34 117 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 HELTA6NFD8 242 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 KNCNA6PVL3 124 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 DISC1C4P0D8 188 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 NXPH3O95157 252 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 IFNA4P05014 189 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 HNRNPCP07910 306 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RBMY1A1P0DJD3 496 aaKnown RBP6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RBMY1CP0DJD4 496 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RBMY1FQ15415 496 aaKnown RBP6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 USF2Q15853 346 aaPredicted RBP6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 C16orf54Q6UWD8 224 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 CSNK1G2-AS1Q8NCQ2 148 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 IL22RA2Q969J5 263 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 PRRT1Q99946 306 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 MRPS26Q9BYN8 205 aaKnown RBP6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 CACFD1Q9UGQ2 172 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 X6R8D5 127 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 FAT2Q9NYQ8 4349 aa6.82□□□□□ -1.32
CDC42-IT1-201ENST00000431803 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 ANKRD20A5PA0PJZ0 165 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 CEBPZOSA8MTT3 80 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 C11orf94C9JXX5 98 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 IL4P05112 153 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 MIFP14174 115 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 NPY1RP25929 384 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 EIF2B2P49770 351 aaKnown RBP6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 AP2S1P53680 142 aaPredicted RBP6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 ACTL10Q5JWF8 245 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 ETFRF1Q6IPR1 90 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 GPR141Q7Z602 305 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 OR51S1Q8NGJ8 323 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 DYNC2LI1Q8TCX1 351 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 Q8WTZ3 238 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 ARPC5LQ9BPX5 153 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 CCDC59Q9P031 241 aaKnown RBP6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RABL2AQ9UBK7 228 aaPredicted RBP6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 HSPB7Q9UBY9 170 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RABL2BQ9UNT1 228 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 PKHD1P08F94 4074 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 PCLOQ9Y6V0 5065 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
CDC42-IT1-201ENST00000431803 FAM90A26D6RGX4 464 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 BUB3O43684 328 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 GSTZ1O43708 216 aaPredicted RBP6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 TOMM40O96008 361 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SULT1A3P0DMM9 295 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SULT1A4P0DMN0 295 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 HLA-DMBP28068 263 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SUPT4H1P63272 117 aaKnown RBP6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 DHRS2Q13268 280 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 IL18Q14116 193 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 PSMG4Q5JS54 123 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 NOXA1Q86UR1 476 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 CLVS1Q8IUQ0 354 aaPredicted RBP6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RAB2BQ8WUD1 216 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 DIRAS2Q96HU8 199 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RAB40CQ96S21 281 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SEPSECSQ9HD40 501 aaKnown RBP6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 NRN1Q9NPD7 142 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 TBC1D24Q9ULP9 559 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 APLNQ9ULZ1 77 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 U3KQ87 197 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 DNAH17Q9UFH2 4485 aa6.8□□□□□ -1.32
CDC42-IT1-201ENST00000431803 A0A0B4J2A0 478 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 IGLL5B9A064 214 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RD3LP0DJH9 198 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 PSG1P11464 419 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 CCR6P51684 374 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SNRPD3P62318 126 aaKnown RBP6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SIGLEC15Q6ZMC9 328 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 Q6ZTC4 211 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 ACY3Q96HD9 319 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SOSTQ9BQB4 213 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 BCL7BQ9BQE9 202 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 CLEC5AQ9NY25 188 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SHPKQ9UHJ6 478 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SCP2D1Q9UJQ7 156 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 KCNIP3Q9Y2W7 256 aa6.79□□□□□ -1.32
CDC42-IT1-201ENST00000431803 TRAV10A0A0B4J240 114 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 H3BMM0 161 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 IFNA10P01566 189 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 HOXA5P20719 270 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 TMBIM6P55061 237 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 ATP5IP56385 69 aaPredicted RBP6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SMCO1Q147U7 214 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 LYZL2Q7Z4W2 148 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 LGI3Q8N145 548 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 OR51G1Q8NGK1 321 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 DTD1Q8TEA8 209 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RNF125Q96EQ8 232 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SCGB3A2Q96PL1 93 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 C1QTNF4Q9BXJ3 329 aa6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 SLIRPQ9GZT3 109 aaKnown RBP6.78□□□□□ -1.32
CDC42-IT1-201ENST00000431803 RBKSQ9H477 322 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms