RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 OR51G1Q8NGK1 321 aa8.52□□□□□ -1.05
HDAC4-202ENST00000430200 WDR12Q9GZL7 423 aaKnown RBP8.52□□□□□ -1.05
HDAC4-202ENST00000430200 TRAV30A0A087WSZ9 112 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 A0A1W2PS18 150 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 HELTA6NFD8 242 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 FABP12A6NFH5 140 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 PRSS46E5RG02 174 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 IAPPP10997 89 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 CCR6P51684 374 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 CMC4P56277 68 aaPredicted RBP8.51□□□□□ -1.05
HDAC4-202ENST00000430200 GAMTQ14353 236 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 Q6ZTC4 211 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 ZNF767PQ75MW2 155 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 TMED4Q7Z7H5 227 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 LGI3Q8N145 548 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 TMEM217Q8N7C4 229 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 RNF125Q96EQ8 232 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 C17orf77Q96MU5 243 aa8.51□□□□□ -1.05
HDAC4-202ENST00000430200 RSL24D1Q9UHA3 163 aaKnown RBP8.51□□□□□ -1.05
HDAC4-202ENST00000430200 KLK5Q9Y337 293 aaPredicted RBP8.51□□□□□ -1.05
HDAC4-202ENST00000430200 DYNC1H1Q14204 4646 aaKnown RBP8.5□□□□□ -1.05
HDAC4-202ENST00000430200 SOCS3O14543 225 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 IFNA10P01566 189 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 SPP1P10451 314 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 PPP1R1AQ13522 171 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 SIGLEC15Q6ZMC9 328 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 Q8WTZ3 238 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 RAB40CQ96S21 281 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 NRN1Q9NPD7 142 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 SCP2D1Q9UJQ7 156 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 NACAE9PAV3 2078 aa8.5□□□□□ -1.05
HDAC4-202ENST00000430200 RD3LP0DJH9 198 aa8.49□□□□□ -1.05
HDAC4-202ENST00000430200 LGALS9CQ6DKI2 356 aa8.49□□□□□ -1.05
HDAC4-202ENST00000430200 CCDC190Q86UF4 302 aa8.49□□□□□ -1.05
HDAC4-202ENST00000430200 OR1S1Q8NH92 325 aa8.49□□□□□ -1.05
HDAC4-202ENST00000430200 PBDC1Q9BVG4 233 aa8.49□□□□□ -1.05
HDAC4-202ENST00000430200 MAGT1Q9H0U3 335 aa8.49□□□□□ -1.05
HDAC4-202ENST00000430200 RABL2AQ9UBK7 228 aaPredicted RBP8.49□□□□□ -1.05
HDAC4-202ENST00000430200 APLNQ9ULZ1 77 aa8.49□□□□□ -1.05
HDAC4-202ENST00000430200 RABL2BQ9UNT1 228 aa8.49□□□□□ -1.05
HDAC4-202ENST00000430200 H3BMM0 161 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 HLA-DRB4P13762 266 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 VAMP1P23763 118 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 HLA-DMBP28068 263 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 OR2F1Q13607 317 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 PYDC2Q56P42 97 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 MORN3Q6PF18 240 aaPredicted RBP8.48□□□□□ -1.05
HDAC4-202ENST00000430200 TMEM182Q6ZP80 229 aaPredicted RBP8.48□□□□□ -1.05
HDAC4-202ENST00000430200 LRTM2Q8N967 370 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 XCL2Q9UBD3 114 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 KCNIP3Q9Y2W7 256 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 HLA-DRB4X5D2U9 266 aa8.48□□□□□ -1.05
HDAC4-202ENST00000430200 F6UB75 175 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 H3BP45 60 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 SCGB2A1O75556 95 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 IFNA4P05014 189 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 MIFP14174 115 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 EIF2B2P49770 351 aaKnown RBP8.47□□□□□ -1.05
HDAC4-202ENST00000430200 FXYD7P58549 80 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 LYZP61626 148 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 TMEM128Q5BJH2 165 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 ETFRF1Q6IPR1 90 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 ZNF709Q8N972 641 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 NARS2Q96I59 477 aaKnown RBP8.47□□□□□ -1.05
HDAC4-202ENST00000430200 C20orf173Q96LM9 149 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 SDHCQ99643 169 aaPredicted RBP8.47□□□□□ -1.05
HDAC4-202ENST00000430200 SRRQ9GZT4 340 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 MFFQ9GZY8 342 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 HRH4Q9H3N8 390 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 TBC1D24Q9ULP9 559 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 U3KQ87 197 aa8.47□□□□□ -1.05
HDAC4-202ENST00000430200 PCLOQ9Y6V0 5065 aa8.46□□□□□ -1.05
HDAC4-202ENST00000430200 ZFP92A6NM28 416 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 NOL3O60936 208 aaKnown RBP8.46□□□□□ -1.06
HDAC4-202ENST00000430200 ADAP1O75689 374 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 CCNKO75909 580 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 SFT2D2O95562 160 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 IGKV3-20P01619 116 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 GATA2P23769 480 aaPredicted RBP8.46□□□□□ -1.06
HDAC4-202ENST00000430200 BTCP35070 178 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 SRPXP78539 464 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 BAK1Q16611 211 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 C12orf74Q32Q52 190 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 OR8G2PQ6IF36 304 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 TOMM5Q8N4H5 51 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 THAP8Q8NA92 274 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 C2CD4CQ8TF44 421 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 SLC25A32Q9H2D1 315 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 FLVCR2Q9UPI3 526 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 DNAH11Q96DT5 4516 aa8.46□□□□□ -1.06
HDAC4-202ENST00000430200 DUXBA0A1W2PPF3 345 aa8.45□□□□□ -1.06
HDAC4-202ENST00000430200 IGLL5B9A064 214 aa8.45□□□□□ -1.06
HDAC4-202ENST00000430200 HOXB5P09067 269 aa8.45□□□□□ -1.06
HDAC4-202ENST00000430200 ANXA3P12429 323 aa8.45□□□□□ -1.06
HDAC4-202ENST00000430200 GGNBP1Q5YKI7 109 aa8.45□□□□□ -1.06
HDAC4-202ENST00000430200 ZNF705AQ6ZN79 300 aaPredicted RBP8.45□□□□□ -1.06
HDAC4-202ENST00000430200 ACOT7LQ6ZUV0 252 aa8.45□□□□□ -1.06
HDAC4-202ENST00000430200 SLC35E1Q96K37 410 aa8.45□□□□□ -1.06
HDAC4-202ENST00000430200 SCGB3A2Q96PL1 93 aa8.45□□□□□ -1.06
HDAC4-202ENST00000430200 SLC35B3Q9H1N7 401 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms