RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SHPKQ9UHJ6 478 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 SCP2D1Q9UJQ7 156 aa12.35□□□□□ -0.43
CPSF4-203ENST00000430038 GDF5OSQ5U4N7 250 aa12.34□□□□□ -0.43
CPSF4-203ENST00000430038 LGI3Q8N145 548 aa12.34□□□□□ -0.43
CPSF4-203ENST00000430038 MCFD2Q8NI22 146 aa12.34□□□□□ -0.43
CPSF4-203ENST00000430038 RABL2AQ9UBK7 228 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-203ENST00000430038 CELA1Q9UNI1 258 aa12.34□□□□□ -0.43
CPSF4-203ENST00000430038 RABL2BQ9UNT1 228 aa12.34□□□□□ -0.43
CPSF4-203ENST00000430038 V9GYH0 126 aa12.34□□□□□ -0.43
CPSF4-203ENST00000430038 HECTD4Q9Y4D8 3996 aa12.34□□□□□ -0.43
CPSF4-203ENST00000430038 IGKV1OR2-108A0A075B7D4 117 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 HELTA6NFD8 242 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 SPP1P10451 314 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 HLA-DMBP28068 263 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 ZNF79Q15937 498 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 ETFRF1Q6IPR1 90 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 MORN3Q6PF18 240 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-203ENST00000430038 C2CD4CQ8TF44 421 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 SCRT1Q9BWW7 348 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 WDR12Q9GZL7 423 aaKnown RBP12.33□□□□□ -0.44
CPSF4-203ENST00000430038 MFFQ9GZY8 342 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 U3KQ87 197 aa12.33□□□□□ -0.44
CPSF4-203ENST00000430038 H3BMM0 161 aa12.32□□□□□ -0.44
CPSF4-203ENST00000430038 IFNA4P05014 189 aa12.32□□□□□ -0.44
CPSF4-203ENST00000430038 SIGLEC15Q6ZMC9 328 aa12.32□□□□□ -0.44
CPSF4-203ENST00000430038 Q6ZTC4 211 aa12.32□□□□□ -0.44
CPSF4-203ENST00000430038 NARS2Q96I59 477 aaKnown RBP12.32□□□□□ -0.44
CPSF4-203ENST00000430038 HRH4Q9H3N8 390 aa12.32□□□□□ -0.44
CPSF4-203ENST00000430038 NRN1Q9NPD7 142 aa12.32□□□□□ -0.44
CPSF4-203ENST00000430038 IGLL5B9A064 214 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 SCGB2A1O75556 95 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 IAPPP10997 89 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 MIFP14174 115 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 ZNF767PQ75MW2 155 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 RNF125Q96EQ8 232 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 C17orf77Q96MU5 243 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 XCL2Q9UBD3 114 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 DNAH2Q9P225 4427 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 HERC2O95714 4834 aa12.31□□□□□ -0.44
CPSF4-203ENST00000430038 AP2S1P53680 142 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-203ENST00000430038 TMED4Q7Z7H5 227 aa12.3□□□□□ -0.44
CPSF4-203ENST00000430038 OR1S1Q8NH92 325 aa12.3□□□□□ -0.44
CPSF4-203ENST00000430038 SCGB3A2Q96PL1 93 aa12.3□□□□□ -0.44
CPSF4-203ENST00000430038 PBDC1Q9BVG4 233 aa12.3□□□□□ -0.44
CPSF4-203ENST00000430038 TBC1D24Q9ULP9 559 aa12.3□□□□□ -0.44
CPSF4-203ENST00000430038 FAT2Q9NYQ8 4349 aa12.3□□□□□ -0.44
CPSF4-203ENST00000430038 PRSS46E5RG02 174 aa12.29□□□□□ -0.44
CPSF4-203ENST00000430038 SOCS3O14543 225 aa12.29□□□□□ -0.44
CPSF4-203ENST00000430038 GPX4P36969 197 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-203ENST00000430038 EIF2B2P49770 351 aaKnown RBP12.29□□□□□ -0.44
CPSF4-203ENST00000430038 FXYD7P58549 80 aa12.29□□□□□ -0.44
CPSF4-203ENST00000430038 OR2F1Q13607 317 aa12.29□□□□□ -0.44
CPSF4-203ENST00000430038 C12orf74Q32Q52 190 aa12.29□□□□□ -0.44
CPSF4-203ENST00000430038 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
CPSF4-203ENST00000430038 TMEM182Q6ZP80 229 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-203ENST00000430038 NOXA1Q86UR1 476 aa12.29□□□□□ -0.44
CPSF4-203ENST00000430038 LRTM2Q8N967 370 aa12.29□□□□□ -0.44
CPSF4-203ENST00000430038 DNAH17Q9UFH2 4485 aa12.29□□□□□ -0.44
CPSF4-203ENST00000430038 ZFP92A6NM28 416 aa12.28□□□□□ -0.44
CPSF4-203ENST00000430038 IGKV3-20P01619 116 aa12.28□□□□□ -0.44
CPSF4-203ENST00000430038 PYDC2Q56P42 97 aa12.28□□□□□ -0.44
CPSF4-203ENST00000430038 TMEM128Q5BJH2 165 aa12.28□□□□□ -0.44
CPSF4-203ENST00000430038 MAGT1Q9H0U3 335 aa12.28□□□□□ -0.44
CPSF4-203ENST00000430038 SEPSECSQ9HD40 501 aaKnown RBP12.28□□□□□ -0.44
CPSF4-203ENST00000430038 HLA-DRB4P13762 266 aa12.27□□□□□ -0.45
CPSF4-203ENST00000430038 NKX2-1P43699 371 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-203ENST00000430038 PPP1R1AQ13522 171 aa12.27□□□□□ -0.45
CPSF4-203ENST00000430038 CCDC190Q86UF4 302 aa12.27□□□□□ -0.45
CPSF4-203ENST00000430038 TOMM5Q8N4H5 51 aa12.27□□□□□ -0.45
CPSF4-203ENST00000430038 CACFD1Q9UGQ2 172 aa12.27□□□□□ -0.45
CPSF4-203ENST00000430038 HLA-DRB4X5D2U9 266 aa12.27□□□□□ -0.45
CPSF4-203ENST00000430038 F6UB75 175 aa12.26□□□□□ -0.45
CPSF4-203ENST00000430038 SFT2D2O95562 160 aa12.26□□□□□ -0.45
CPSF4-203ENST00000430038 ANXA3P12429 323 aa12.26□□□□□ -0.45
CPSF4-203ENST00000430038 VAMP1P23763 118 aa12.26□□□□□ -0.45
CPSF4-203ENST00000430038 GATA2P23769 480 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-203ENST00000430038 LYZP61626 148 aa12.26□□□□□ -0.45
CPSF4-203ENST00000430038 SNRPD3P62318 126 aaKnown RBP12.26□□□□□ -0.45
CPSF4-203ENST00000430038 ZNF705AQ6ZN79 300 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-203ENST00000430038 ZNF709Q8N972 641 aa12.26□□□□□ -0.45
CPSF4-203ENST00000430038 THAP8Q8NA92 274 aa12.26□□□□□ -0.45
CPSF4-203ENST00000430038 C20orf173Q96LM9 149 aa12.26□□□□□ -0.45
CPSF4-203ENST00000430038 KRTAP17-1Q9BYP8 105 aa12.26□□□□□ -0.45
CPSF4-203ENST00000430038 RBM38Q9H0Z9 239 aaKnown RBP12.26□□□□□ -0.45
CPSF4-203ENST00000430038 KIAA1109Q2LD37 5005 aa12.25□□□□□ -0.45
CPSF4-203ENST00000430038 IGHV4-4A0A075B6R2 117 aa12.25□□□□□ -0.45
CPSF4-203ENST00000430038 C11orf94C9JXX5 98 aa12.25□□□□□ -0.45
CPSF4-203ENST00000430038 SRPXP78539 464 aa12.25□□□□□ -0.45
CPSF4-203ENST00000430038 OR8G2PQ6IF36 304 aa12.25□□□□□ -0.45
CPSF4-203ENST00000430038 SLC35E1Q96K37 410 aa12.25□□□□□ -0.45
CPSF4-203ENST00000430038 LINC00052Q96N35 136 aa12.25□□□□□ -0.45
CPSF4-203ENST00000430038 TRGV9Q99603 122 aa12.25□□□□□ -0.45
CPSF4-203ENST00000430038 SAV1Q9H4B6 383 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-203ENST00000430038 PLA2G2EQ9NZK7 142 aa12.25□□□□□ -0.45
CPSF4-203ENST00000430038 TRAV10A0A0B4J240 114 aa12.24□□□□□ -0.45
CPSF4-203ENST00000430038 DUXBA0A1W2PPF3 345 aa12.24□□□□□ -0.45
CPSF4-203ENST00000430038 ZNF705FA8MVS1 300 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-203ENST00000430038 WRBO00258 174 aa12.24□□□□□ -0.45
CPSF4-203ENST00000430038 HOXB5P09067 269 aa12.24□□□□□ -0.45
CPSF4-203ENST00000430038 ZNF705DP0CH99 300 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms