RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 SMDT1Q9H4I9 107 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 IL17RELQ6ZVW7 336 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 TNFRSF18Q9Y5U5 241 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 TRGV2A0A075B6R0 118 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 TMEM238LA0A1B0GVL6 79 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 A6NJY4 79 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 ZNF506Q5JVG8 444 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 FAM74A7A6NL05 159 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 FAM90A9PA6NNJ1 464 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 RIPPLY3P57055 190 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 HEATR5AQ86XA9 2040 aa10.52□□□□□ -0.72
PTCH1-207ENST00000429896 ZNF815PA8K554 130 aa10.52□□□□□ -0.72
PTCH1-207ENST00000429896 SPRNQ5BIV9 151 aa10.52□□□□□ -0.72
PTCH1-207ENST00000429896 RNASEH2CQ8TDP1 164 aaKnown RBP10.52□□□□□ -0.72
PTCH1-207ENST00000429896 TRAV14DV4A0A0A6YYC5 116 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 CFPP27918 469 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 TFF3Q07654 80 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 TMEM249Q2WGJ8 235 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 LEMD1Q68G75 181 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 NABP2Q9BQ15 211 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 RHOGP84095 191 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 SLC17A3O00476 420 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 C18orf12Q96KH6 178 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 ARID1AO14497 2285 aa10.52□□□□□ -0.73
PTCH1-207ENST00000429896 C12orf54Q6X4T0 127 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 LRRC75A-AS1Q8N1F1 130 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 SIAH2O43255 324 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 GGCTO75223 188 aaKnown RBP10.51□□□□□ -0.73
PTCH1-207ENST00000429896 C8orf88P0DMB2 117 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 C5orf64Q2M2E5 130 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 TMEM95Q3KNT9 176 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 C11orf53Q8IXP5 236 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 CDC42EP3Q9UKI2 254 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 ITGB1BP1O14713 200 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 TMEM136Q6ZRR5 245 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 MPTX1A8MV57 137 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 C5orf24Q7Z6I8 188 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 C3orf56Q8N813 242 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 KIR2DL4Q99706 377 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 ZNF257Q9Y2Q1 563 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 SOX21Q9Y651 276 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-207ENST00000429896 MALP21145 153 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 ZNF415Q09FC8 603 aa10.51□□□□□ -0.73
PTCH1-207ENST00000429896 PUSL1Q8N0Z8 303 aaKnown RBP10.51□□□□□ -0.73
PTCH1-207ENST00000429896 MBNL3Q9NUK0 354 aaKnown RBP10.51□□□□□ -0.73
PTCH1-207ENST00000429896 A8MXK9 166 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 DNAL4O96015 105 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 TSPOP30536 169 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 CENPWQ5EE01 88 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 IMMP2LQ96T52 175 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 IGHV3-64A0A075B6Q5 118 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 IGFBP2P18065 325 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 CBLN1P23435 193 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 SERF2P84101 59 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 OR1P1Q8NH06 330 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 CACNA1GO43497 2377 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 A0A0U1RRA0 63 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 CD33P20138 364 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 C17orf58Q2M2W7 97 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 DEFB121Q5J5C9 76 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 PRCDQ00LT1 54 aa10.5□□□□□ -0.73
PTCH1-207ENST00000429896 MEF2BQ02080 365 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-207ENST00000429896 LHBP01229 141 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 PPIFP30405 207 aaKnown RBP10.49□□□□□ -0.73
PTCH1-207ENST00000429896 TTC32Q5I0X7 151 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 KCNS1Q96KK3 526 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 CTSZQ9UBR2 303 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 NPC2P61916 151 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 CYP2G1PQ6ZSU1 146 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 OR5AN1Q8NGI8 311 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 K7ERU9 68 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 GGACTQ9BVM4 153 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 DANCRP0C864 163 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 C1orf122Q6ZSJ8 110 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 STHQ8IWL8 128 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 SFRP2Q96HF1 295 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 DIDO1Q9BTC0 2240 aaKnown RBP10.49□□□□□ -0.73
PTCH1-207ENST00000429896 RNF222A6NCQ9 220 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 C22orf46C9J442 243 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 GNG5P63218 68 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 COX19Q49B96 90 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 LY6G6FQ5SQ64 297 aa10.49□□□□□ -0.73
PTCH1-207ENST00000429896 IGHV3-73A0A0B4J1V6 119 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 TYMSP04818 313 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 TEX38Q6PEX7 206 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 CACNG8Q8WXS5 425 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 PIEZO1Q92508 2521 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 FXYD7P58549 80 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 TMEM167AQ8TBQ9 72 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 SCO2A0A1W2PP80 73 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 IL6RP08887 468 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-207ENST00000429896 MYOD1P15172 320 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 GPX4P36969 197 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-207ENST00000429896 C14orf144Q96I85 54 aa10.48□□□□□ -0.73
PTCH1-207ENST00000429896 C1orf147Q96MC9 270 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-207ENST00000429896 MRPL16Q9NX20 251 aaKnown RBP10.48□□□□□ -0.73
PTCH1-207ENST00000429896 HOXB4P17483 251 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms