RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 CST7O76096 145 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 NPPCP23582 126 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 AKR1C1Q04828 323 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 SLC38A11Q08AI6 406 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 LCN12Q6JVE5 192 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 TEPPQ6URK8 271 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 Q6ZNX1 250 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 SLC45A2Q9UMX9 530 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 U3KQE9 123 aa11.32□□□□□ -0.6
GARNL3-204ENST00000429629 NUP62P37198 522 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-204ENST00000429629 KRTAP10-11P60412 298 aa11.31□□□□□ -0.6
GARNL3-204ENST00000429629 EWSR1Q01844 656 aaKnown RBP eCLIP11.31□□□□□ -0.6
GARNL3-204ENST00000429629 METTL26Q96S19 204 aa11.31□□□□□ -0.6
GARNL3-204ENST00000429629 TMEM231Q9H6L2 316 aa11.31□□□□□ -0.6
GARNL3-204ENST00000429629 UQCC1Q9NVA1 299 aa11.31□□□□□ -0.6
GARNL3-204ENST00000429629 CHEK1O14757 476 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 MPDU1O75352 247 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 S100A7P31151 101 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 PLP1P60201 277 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 ZNF90Q03938 601 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 RAB31Q13636 194 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 LAMTOR1Q6IAA8 161 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 DYNLRB2Q8TF09 96 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 RNF125Q96EQ8 232 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 NARS2Q96I59 477 aaKnown RBP11.3□□□□□ -0.6
GARNL3-204ENST00000429629 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 RHPN1-AS1Q9BWJ2 59 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 MBD2Q9UBB5 411 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 WDR83OSQ9Y284 106 aa11.3□□□□□ -0.6
GARNL3-204ENST00000429629 ZNF256Q9Y2P7 627 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-204ENST00000429629 RPL12P30050 165 aaKnown RBP11.29□□□□□ -0.6
GARNL3-204ENST00000429629 NHLH2Q02577 135 aa11.29□□□□□ -0.6
GARNL3-204ENST00000429629 CD300EQ496F6 205 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-204ENST00000429629 PXDC1Q5TGL8 231 aa11.29□□□□□ -0.6
GARNL3-204ENST00000429629 CYP2G1PQ6ZSU1 146 aa11.29□□□□□ -0.6
GARNL3-204ENST00000429629 TMEM217Q8N7C4 229 aa11.29□□□□□ -0.6
GARNL3-204ENST00000429629 BPIFCQ8NFQ6 507 aa11.29□□□□□ -0.6
GARNL3-204ENST00000429629 MLXQ9UH92 298 aa11.29□□□□□ -0.6
GARNL3-204ENST00000429629 SMCO3A2RU48 225 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 TSPAN4O14817 238 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 IL4P05112 153 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
GARNL3-204ENST00000429629 C1orf194Q5T5A4 169 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 S100A7AQ86SG5 101 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 ZNF546Q86UE3 836 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 LILRB2Q8N423 598 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 HSPB11Q9Y547 144 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 MEGF8Q7Z7M0 2845 aa11.28□□□□□ -0.6
GARNL3-204ENST00000429629 ZNF785A8K8V0 405 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 AGPAT2O15120 278 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 DFFBO76075 338 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 EIF2B2P49770 351 aaKnown RBP11.27□□□□□ -0.61
GARNL3-204ENST00000429629 AP2S1P53680 142 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-204ENST00000429629 USF2Q15853 346 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-204ENST00000429629 BTNL8Q6UX41 500 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 RBPMS2Q6ZRY4 209 aaKnown RBP11.27□□□□□ -0.61
GARNL3-204ENST00000429629 OR5C1Q8NGR4 320 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 OR2T35Q8NGX2 323 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 GRAMD2BQ96HH9 432 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 AQP10Q96PS8 301 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 SPAG8Q99932 426 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-204ENST00000429629 NEURL2Q9BR09 285 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 RNF24Q9Y225 148 aa11.27□□□□□ -0.61
GARNL3-204ENST00000429629 IGHV3OR16-8A0A075B7F1 116 aa11.26□□□□□ -0.61
GARNL3-204ENST00000429629 TRAV2A0A0B4J234 112 aa11.26□□□□□ -0.61
GARNL3-204ENST00000429629 BUB3O43684 328 aa11.26□□□□□ -0.61
GARNL3-204ENST00000429629 GP9P14770 177 aa11.26□□□□□ -0.61
GARNL3-204ENST00000429629 EDN2P20800 178 aa11.26□□□□□ -0.61
GARNL3-204ENST00000429629 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
GARNL3-204ENST00000429629 TMEM61Q8N0U2 210 aa11.26□□□□□ -0.61
GARNL3-204ENST00000429629 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-204ENST00000429629 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-204ENST00000429629 ZNF207O43670 478 aaKnown RBP11.25□□□□□ -0.61
GARNL3-204ENST00000429629 CAMLGP49069 296 aa11.25□□□□□ -0.61
GARNL3-204ENST00000429629 OR2F1Q13607 317 aa11.25□□□□□ -0.61
GARNL3-204ENST00000429629 Q5BKY6 102 aa11.25□□□□□ -0.61
GARNL3-204ENST00000429629 C16orf54Q6UWD8 224 aa11.25□□□□□ -0.61
GARNL3-204ENST00000429629 TMEM182Q6ZP80 229 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-204ENST00000429629 ST8SIA2Q92186 375 aa11.25□□□□□ -0.61
GARNL3-204ENST00000429629 RNF2Q99496 336 aa11.25□□□□□ -0.61
GARNL3-204ENST00000429629 FAM110AQ9BQ89 295 aa11.25□□□□□ -0.61
GARNL3-204ENST00000429629 AURKAIP1Q9NWT8 199 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-204ENST00000429629 IZUMO1RA6ND01 250 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 HELTA6NFD8 242 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 G3V3Q6 166 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 HYPMO75409 117 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 APOHP02749 345 aaPredicted RBP11.24□□□□□ -0.61
GARNL3-204ENST00000429629 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
GARNL3-204ENST00000429629 PAFAH1B2P68402 229 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 PRR20EP86478 221 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 PRR20CP86479 221 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 PRR20DP86480 221 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 PRR20BP86481 221 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 PRR20AP86496 221 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 DEFA6Q01524 100 aa11.24□□□□□ -0.61
GARNL3-204ENST00000429629 INO80EQ8NBZ0 244 aaPredicted RBP11.24□□□□□ -0.61
GARNL3-204ENST00000429629 MGST2Q99735 147 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms