RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
HLA-F-219ENST00000429294 FAT2Q9NYQ8 4349 aa9.41□□□□□ -0.9
HLA-F-219ENST00000429294 IGHV3OR16-12A0A075B7B8 117 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 TEX13DA0A0J9YY54 714 aaPredicted RBP9.4□□□□□ -0.9
HLA-F-219ENST00000429294 BUB3O43684 328 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 CDS2O95674 445 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 HLA-DRB4P13762 266 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 ID1P41134 155 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 NKX2-1P43699 371 aaPredicted RBP9.4□□□□□ -0.9
HLA-F-219ENST00000429294 USF2Q15853 346 aaPredicted RBP9.4□□□□□ -0.9
HLA-F-219ENST00000429294 OR13C8Q8NGS7 320 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 RBPMSQ93062 196 aaKnown RBP9.4□□□□□ -0.9
HLA-F-219ENST00000429294 ACY3Q96HD9 319 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 ABHD1Q96SE0 405 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 TMEM222Q9H0R3 208 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 MTFP1Q9UDX5 166 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 RFNGQ9Y644 331 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 DNAH2Q9P225 4427 aa9.4□□□□□ -0.9
HLA-F-219ENST00000429294 A0A0G2JRQ6 117 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 RAB3DO95716 219 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 TOMM40O96008 361 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 TAS2R19P59542 299 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 AARDQ4LEZ3 155 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 SPANXN2Q5MJ10 180 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 ZNF705AQ6ZN79 300 aaPredicted RBP9.39□□□□□ -0.91
HLA-F-219ENST00000429294 Q6ZRM9 215 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 OR52I2Q8NH67 350 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 MARCH1Q8TCQ1 289 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 NPIPB3Q92617 1050 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 CACNG5Q9UF02 275 aa9.39□□□□□ -0.91
HLA-F-219ENST00000429294 IGLV2-18A0A075B6J9 118 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
HLA-F-219ENST00000429294 IGKV3-20P01619 116 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 OR5AC1P0C628 307 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 ZNF705DP0CH99 300 aaPredicted RBP9.38□□□□□ -0.91
HLA-F-219ENST00000429294 ZNF705BP0CI00 300 aaPredicted RBP9.38□□□□□ -0.91
HLA-F-219ENST00000429294 RGS21Q2M5E4 152 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 TMEM229BQ8NBD8 167 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 OR51G1Q8NGK1 321 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 COQ8AQ8NI60 647 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 RNF125Q96EQ8 232 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 LINC00052Q96N35 136 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 NIPSNAP3BQ9BS92 247 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 CCDC32Q9BV29 185 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 EXTL2Q9UBQ6 330 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 GOLT1BQ9Y3E0 138 aa9.38□□□□□ -0.91
HLA-F-219ENST00000429294 CD74P04233 296 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 FABP1P07148 127 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 PSG1P11464 419 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 MEF2DQ14814 521 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 RNF212Q495C1 297 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 TMEM268Q5VZI3 342 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 SPATA31B1PQ5VZV4 182 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 STEAP1BQ6NZ63 245 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 FOXI2Q6ZQN5 318 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 CCDC190Q86UF4 302 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 OR4B1Q8NGF8 309 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 OR4D10Q8NGI6 311 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 GLYATL2Q8WU03 294 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 GPR146Q96CH1 333 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 C7orf50Q9BRJ6 194 aaKnown RBP9.37□□□□□ -0.91
HLA-F-219ENST00000429294 PBDC1Q9BVG4 233 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 NAA60Q9H7X0 242 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 DKK2Q9UBU2 259 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 U3KQ87 197 aa9.37□□□□□ -0.91
HLA-F-219ENST00000429294 DISC1C4P0D8 188 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 HBE1P02100 147 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 SULT1A3P0DMM9 295 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 SULT1A4P0DMN0 295 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 HTN3P15516 51 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 PSMB3P49720 205 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 FXYD7P58549 80 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 SSBP1Q04837 148 aaKnown RBP9.36□□□□□ -0.91
HLA-F-219ENST00000429294 KLF9Q13886 244 aaPredicted RBP9.36□□□□□ -0.91
HLA-F-219ENST00000429294 SURF2Q15527 256 aaPredicted RBP9.36□□□□□ -0.91
HLA-F-219ENST00000429294 FAM222AQ5U5X8 452 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 SAMD13Q5VXD3 122 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 OR8G2PQ6IF36 304 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 EBLN2Q6P2I7 272 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 SELENOHQ8IZQ5 122 aaKnown RBP9.36□□□□□ -0.91
HLA-F-219ENST00000429294 PPP1R14BQ96C90 147 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 SAV1Q9H4B6 383 aaPredicted RBP9.36□□□□□ -0.91
HLA-F-219ENST00000429294 DNAH11Q96DT5 4516 aa9.36□□□□□ -0.91
HLA-F-219ENST00000429294 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 GABARAPH6UMI1 98 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 ATP5IP56385 69 aaPredicted RBP9.35□□□□□ -0.91
HLA-F-219ENST00000429294 DEFA1P59665 94 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 DEFA3P59666 94 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 OXA1LQ15070 435 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 NMSQ5H8A3 153 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 C1orf194Q5T5A4 169 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 C1orf134Q5TEV5 83 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 GDF5OSQ5U4N7 250 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 Q6ZNX1 250 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 LGI3Q8N145 548 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 LHFPL5Q8TAF8 219 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 CLUHP3Q96NS8 147 aa9.35□□□□□ -0.91
HLA-F-219ENST00000429294 RABL2AQ9UBK7 228 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms