RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 PSMB11A5LHX3 300 aa12.97□□□□□ -0.33
C4A-243ENST00000428956 CA1P00915 261 aaPredicted RBP12.97□□□□□ -0.33
C4A-243ENST00000428956 TFF1P04155 84 aa12.96□□□□□ -0.33
C4A-243ENST00000428956 CNTFRP26992 372 aa12.96□□□□□ -0.33
C4A-243ENST00000428956 SPATA31B1PQ5VZV4 182 aa12.96□□□□□ -0.33
C4A-243ENST00000428956 CHTOPQ9Y3Y2 248 aaKnown RBP12.96□□□□□ -0.33
C4A-243ENST00000428956 COLCA1Q6ZS62 124 aa12.96□□□□□ -0.33
C4A-243ENST00000428956 SLC25A39Q9BZJ4 359 aaPredicted RBP12.96□□□□□ -0.33
C4A-243ENST00000428956 NPFFR1Q9GZQ6 430 aa12.96□□□□□ -0.33
C4A-243ENST00000428956 CD59P13987 128 aa12.96□□□□□ -0.33
C4A-243ENST00000428956 MDS2Q8NDY4 140 aa12.96□□□□□ -0.33
C4A-243ENST00000428956 OR2K2Q8NGT1 345 aa12.96□□□□□ -0.33
C4A-243ENST00000428956 SRSF8Q9BRL6 282 aaKnown RBP12.96□□□□□ -0.33
C4A-243ENST00000428956 FREM3P0C091 2139 aa12.96□□□□□ -0.34
C4A-243ENST00000428956 TMEM262E9PQX1 116 aa12.96□□□□□ -0.34
C4A-243ENST00000428956 HOXA3O43365 443 aaPredicted RBP12.95□□□□□ -0.34
C4A-243ENST00000428956 CD7P09564 240 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 FAM90A2PQ658T7 463 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 RBMY1BA6NDE4 496 aaKnown RBP12.95□□□□□ -0.34
C4A-243ENST00000428956 RBMY1EA6NEQ0 496 aaKnown RBP12.95□□□□□ -0.34
C4A-243ENST00000428956 C15orf62A8K5M9 175 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 RBMY1DP0C7P1 496 aaKnown RBP12.95□□□□□ -0.34
C4A-243ENST00000428956 RBMY1A1P0DJD3 496 aaKnown RBP12.95□□□□□ -0.34
C4A-243ENST00000428956 RBMY1CP0DJD4 496 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 TMEM200BQ69YZ2 307 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 TMEM178BH3BS89 294 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 LINC01587Q99440 93 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 C5orf63A6NC05 138 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 PSG1P11464 419 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 ADCYAP1P18509 176 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 SPSB3Q6PJ21 355 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 UNQ6494/PRO21346Q6UXR6 183 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 RPRMLQ8N4K4 120 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 GZMBP10144 247 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 PAX8Q06710 450 aa12.95□□□□□ -0.34
C4A-243ENST00000428956 H0YJW9 148 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 PYY3Q5JQD4 70 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 PRSS22Q9GZN4 317 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 SPTA1P02549 2419 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 PF4P02776 101 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 NTF4P34130 210 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 MST1LQ2TV78 715 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 LAGE3Q14657 143 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 ZNF124Q15973 351 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 SBF1O95248 1867 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 IGHV1-3A0A0C4DH29 117 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 RNF182Q8N6D2 247 aa12.94□□□□□ -0.34
C4A-243ENST00000428956 ITLN2Q8WWU7 325 aaPredicted RBP12.94□□□□□ -0.34
C4A-243ENST00000428956 IGHV3OR16-8A0A075B7F1 116 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 TPTE2P1Q5T6R2 138 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 Q0VFX4 171 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 SIGLEC15Q6ZMC9 328 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 IGKV3OR2-268A0A0C4DH90 116 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 LINC00473A8K010 186 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 IGHG3P01860 377 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 RNF144BQ7Z419 303 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 GFRA4Q9GZZ7 299 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 PLNP26678 52 aa12.93□□□□□ -0.34
C4A-243ENST00000428956 MBD3L4A6NDZ8 208 aaPredicted RBP12.92□□□□□ -0.34
C4A-243ENST00000428956 MBD3L3A6NE82 208 aaPredicted RBP12.92□□□□□ -0.34
C4A-243ENST00000428956 MBD3L5A6NJ08 208 aaPredicted RBP12.92□□□□□ -0.34
C4A-243ENST00000428956 RNASE1P07998 156 aaKnown RBP12.92□□□□□ -0.34
C4A-243ENST00000428956 MBD3L2Q8NHZ7 208 aaPredicted RBP12.92□□□□□ -0.34
C4A-243ENST00000428956 FNDC4Q9H6D8 234 aaPredicted RBP12.92□□□□□ -0.34
C4A-243ENST00000428956 PMS2P5A8MQ11 134 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 WNT2P09544 360 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 M0R1W7 72 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 IGHV3-11P01762 117 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 BMPERQ8N8U9 685 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 NUP35Q8NFH5 326 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 ZNF479Q96JC4 524 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 GAFA1Q96PS6 74 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 MLNRO43193 412 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 TOMM40O96008 361 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 C9orf139Q6ZV77 190 aa12.92□□□□□ -0.34
C4A-243ENST00000428956 ZNF815PA8K554 130 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
C4A-243ENST00000428956 NCOR1P1Q9H4R4 102 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 ABCA7Q8IZY2 2146 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 TRAV3A0A0B4J244 114 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 HAX1O00165 279 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 DLEU1O43261 78 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 C10orf55Q5SWW7 151 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 LDLRAD2Q5SZI1 272 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 Q0VG73 95 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 TRAV41A0A0B4J266 112 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 TMEM256Q8N2U0 113 aa12.91□□□□□ -0.34
C4A-243ENST00000428956 CDKN1AP38936 164 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 SAMD5Q5TGI4 173 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 SCRT1Q9BWW7 348 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 A0A0G2JRQ6 117 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 PSG3Q16557 428 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 RLFQ13129 1914 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 C3orf79P0CE67 100 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 RNASE2P10153 161 aaKnown RBP12.9□□□□□ -0.34
C4A-243ENST00000428956 METRNQ9UJH8 293 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 TRBV7-9A0A0J9YWB2 115 aa12.9□□□□□ -0.34
C4A-243ENST00000428956 ZCCHC24Q8N2G6 241 aaKnown RBP12.9□□□□□ -0.34
C4A-243ENST00000428956 D6R8Y8 96 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms