RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 DUX3Q96PT4 197 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 C20orf24Q9BUV8 137 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 PBDC1Q9BVG4 233 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 PARD6GQ9BYG4 376 aaPredicted RBP6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 SH3BGRL3Q9H299 93 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 PXMP4Q9Y6I8 212 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 IGHV3OR16-8A0A075B7F1 116 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZNF320A2RRD8 509 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 LINC01619G3V211 115 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 TSPAN15O95858 294 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 HSPB1P04792 205 aaKnown RBP6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 IL4P05112 153 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 PSG1P11464 419 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 GATA2P23769 480 aaPredicted RBP6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 HOXD3P31249 432 aaPredicted RBP6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 YPEL3P61236 119 aaPredicted RBP6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 B2MP61769 119 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 SELENOTP62341 195 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 FFAR4Q5NUL3 377 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 MIC13Q5XKP0 118 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 BAP18Q8IXM2 172 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 STPG3Q8N7X2 389 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 OR11H1Q8NG94 326 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 OR51G1Q8NGK1 321 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 STOML3Q8TAV4 291 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 Q8WTZ3 238 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 ST8SIA2Q92186 375 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 RAX2Q96IS3 184 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 CITED1Q99966 193 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 GINS3Q9BRX5 216 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 SLC25A32Q9H2D1 315 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 DOK5Q9P104 306 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 SLC45A2Q9UMX9 530 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 TIMM9Q9Y5J7 89 aa6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 PUS1Q9Y606 427 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGA1P4-201ENST00000428643 ADARB2-AS1A8MUL3 147 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 CCL24O00175 119 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 NDUFA4O00483 81 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 COX7A2P2O60397 106 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 PF4P02776 101 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR5G3P0C626 314 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 ORM2P19652 201 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 SLURP1P55000 103 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 SYNJ2BPP57105 145 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 FAM106AQ4KMX7 169 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 EIF5AL1Q6IS14 154 aaKnown RBP6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 SHISA2Q6UWI4 295 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 TOMM20LQ6UXN7 152 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 TMEM182Q6ZP80 229 aaPredicted RBP6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR4F17Q8NGA8 305 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR1B1Q8NGR6 318 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR2G3Q8NGZ4 309 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 TMED6Q8WW62 240 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 TMEM190Q8WZ59 177 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 RCC1LQ96I51 464 aaKnown RBP6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR4F4Q96R69 305 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 PSMG3Q9BT73 122 aaPredicted RBP6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 ZNF747Q9BV97 191 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 ARV1Q9H2C2 271 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 SLC39A9Q9NUM3 307 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 RFNGQ9Y644 331 aa6.08□□□□□ -1.44
HMGA1P4-201ENST00000428643 STAB1Q9NY15 2570 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 ZNF207O43670 478 aaKnown RBP6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 HYPMO75409 117 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 CFDP00746 253 aaPredicted RBP6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 RPL29P47914 159 aaKnown RBP6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 PRR20EP86478 221 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 PRR20CP86479 221 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 PRR20DP86480 221 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 PRR20BP86481 221 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 PRR20AP86496 221 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 FHL3Q13643 280 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 AKR1C8PQ5T2L2 129 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 UNQ9165/PRO28630Q6UXU0 137 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 Q6ZRG5 221 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 C1QL4Q86Z23 238 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 RNF125Q96EQ8 232 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 METTL26Q96S19 204 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 PFDN5Q99471 154 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 ZFAND3Q9H8U3 227 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 HIGD1AQ9Y241 93 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 UFC1Q9Y3C8 167 aa6.07□□□□□ -1.44
HMGA1P4-201ENST00000428643 M0QZ24 198 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 SEC11BP0C7V7 166 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 SPP1P10451 314 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 MYCNOSP40205 109 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 RAB2AP61019 212 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 SERF2P84101 59 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 USF2Q15853 346 aaPredicted RBP6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 ACOT6Q3I5F7 207 aaPredicted RBP6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 GCSAMLQ5JQS6 135 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 PXDC1Q5TGL8 231 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 C10orf113Q5VZT2 155 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 FAM122CQ6P4D5 195 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 ALKAL2Q6UX46 152 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 REC114Q7Z4M0 266 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 GPHB5Q86YW7 130 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR1L4Q8NGR5 311 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 PHYHIPLQ96FC7 376 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 NARS2Q96I59 477 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms