RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 IGHV7-81A0A0B4J1V7 117 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 A0A1W2PPQ1 181 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 A0A1W2PRE2 83 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 H3BTX0 84 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 GOSR1O95249 250 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 RD3LP0DJH9 198 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 C11orf52Q96A22 123 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 LINC00479Q96M42 142 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 HSPB9Q9BQS6 159 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 UBR5O95071 2799 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-210ENST00000428307 ABCA2Q9BZC7 2435 aa8.21□□□□□ -1.1
HDAC9-210ENST00000428307 TRAV40A0A0B4J280 105 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 A0A0U1RQK1 487 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 VWC2LB2RUY7 222 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 K7EN84 100 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 NDUFS8O00217 210 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 IGHV3-23P01764 117 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 S100PP25815 95 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 FXYD5Q96DB9 178 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 SFRP2Q96HF1 295 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 C1RLQ9NZP8 487 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 ARL2-SNX15V9GYD0 113 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 TRBV24-1A0A075B6N3 115 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 EGR2P11161 476 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-210ENST00000428307 OR5I1Q13606 314 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 TMEM219Q86XT9 240 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 C1QL4Q86Z23 238 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 OR1L6Q8NGR2 347 aa8.2□□□□□ -1.1
HDAC9-210ENST00000428307 POLR3KQ9Y2Y1 108 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-210ENST00000428307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC9-210ENST00000428307 IGLV11-55A0A075B6I3 123 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 MDFIC2A0A1B0GVS7 189 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 C5orf52A6NGY3 159 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 NPIPB5A8MRT5 1133 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 GNG7O60262 68 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 OR2J3O76001 311 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 GNG4P50150 75 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 FABP9Q0Z7S8 132 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 CENPWQ5EE01 88 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 TTC9CQ8N5M4 171 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 HIGD1AQ9Y241 93 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 SOX21Q9Y651 276 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-210ENST00000428307 ABCA12Q86UK0 2595 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 LINC01548A6NM66 108 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 NDUFB8O95169 186 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 NBEAP1P0C6P0 100 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 COX6B1P14854 86 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 COL8A1P27658 744 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 ECSCRQ19T08 205 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 TEX38Q6PEX7 206 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 C7orf69Q9H7B7 122 aa8.19□□□□□ -1.1
HDAC9-210ENST00000428307 IGHV1-69DA0A0B4J2H0 117 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 SLC17A3O00476 420 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 IGHV1-69P01742 117 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 PLP1P60201 277 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 Q56UQ5 140 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 NHLRC2Q8NBF2 726 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 STXBP6Q8NFX7 210 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 SGMS2Q8NHU3 365 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 SLC25A39Q9BZJ4 359 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-210ENST00000428307 TRAV34A0A0B4J273 112 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 C9JCJ5 164 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 PPP5D1E7EU14 171 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 ATP6V0E1O15342 81 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 HLA-DRB1P01911 266 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 IL4P05112 153 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 MFAP4P55083 255 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 ERVFC1-1P60608 527 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 GNG5P63218 68 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 ZNF329Q86UD4 541 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 OR10G8Q8NGN5 311 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 FRZBQ92765 325 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 SGK494Q96LW2 274 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 RPH3ALQ9UNE2 315 aa8.18□□□□□ -1.1
HDAC9-210ENST00000428307 PGPA6NDG6 321 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 G3V318 75 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST1H2BKO60814 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST1H2BJP06899 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 MSMBP08118 114 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 CD99P14209 185 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST1H2BOP23527 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST1H2BBP33778 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 NDUFA6P56556 154 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST1H2BDP58876 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST1H2BCP62807 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST2H2BEQ16778 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-210ENST00000428307 KCNIP4Q6PIL6 250 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 UNQ5815/PRO19632Q6UWF5 114 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 ZNF600Q6ZNG1 722 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 BCL6BQ8N143 479 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-210ENST00000428307 ZNF491Q8N8L2 437 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST1H2BHQ93079 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST1H2BNQ99877 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIST1H2BMQ99879 126 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 HIF1ANQ9NWT6 349 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 C21orf62Q9NYP8 219 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 THYN1Q9P016 225 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms