RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 KLF17Q5JT82 389 aaPredicted RBP11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 IGF2BP2-AS1Q96M15 143 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 LPAR2Q9HBW0 351 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 NPIPB5A8MRT5 1133 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 PEX7O00628 323 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 CNN1P51911 297 aaKnown RBP11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 PDZD11Q5EBL8 140 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 ASPHD1Q5U4P2 390 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 GFI1BQ5VTD9 330 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 CCL19Q99731 98 aa11.07□□□□□ -0.64
APOBEC3D-202ENST00000427494 IGKV1-17P01599 117 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 IGLV2-8P01709 118 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 FABP1P07148 127 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 MGST1P10620 155 aaKnown RBP11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 GP9P14770 177 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 SAA4P35542 130 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 TAS2R60P59551 318 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 RANP62826 216 aaKnown RBP11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 FAM120AOSQ5T036 256 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 HIST3H2BBQ8N257 126 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 LINC00479Q96M42 142 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 CDC42EP3Q9UKI2 254 aa11.06□□□□□ -0.64
APOBEC3D-202ENST00000427494 GCGP01275 180 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 FAM106CPP0CH98 169 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 RD3LP0DJH9 198 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 S100A2P29034 98 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 GNG5P63218 68 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 RPEL1Q2QD12 228 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 AJUBAQ96IF1 538 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 GAR1Q9NY12 217 aaKnown RBP11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 PITPNC1Q9UKF7 332 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 S4R3C0 116 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 V9GYV3 84 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 IGLV11-55A0A075B6I3 123 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 GOSR1O95249 250 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 SLC25A5P05141 298 aaKnown RBP11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 NBEAP1P0C6P0 100 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 MYCNOSP40205 109 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 RPL15P61313 204 aaKnown RBP11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 NHLRC2Q8NBF2 726 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 PIMREGQ9BSJ6 248 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 SLC25A39Q9BZJ4 359 aaPredicted RBP11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 GPR61Q9BZJ8 451 aa11.05□□□□□ -0.64
APOBEC3D-202ENST00000427494 TRAV34A0A0B4J273 112 aa11.04□□□□□ -0.64
APOBEC3D-202ENST00000427494 PGPA6NDG6 321 aa11.04□□□□□ -0.64
APOBEC3D-202ENST00000427494 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-202ENST00000427494 BRS3P32247 399 aa11.04□□□□□ -0.64
APOBEC3D-202ENST00000427494 FANCD2OSQ96PS1 177 aa11.04□□□□□ -0.64
APOBEC3D-202ENST00000427494 OSTCQ9NRP0 149 aa11.04□□□□□ -0.64
APOBEC3D-202ENST00000427494 C1RLQ9NZP8 487 aa11.04□□□□□ -0.64
APOBEC3D-202ENST00000427494 TRAPPC1Q9Y5R8 145 aa11.04□□□□□ -0.64
APOBEC3D-202ENST00000427494 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
APOBEC3D-202ENST00000427494 TRAV9-1A0A075B6T8 112 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 XKRY2A2RUG3 117 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 H3BTX0 84 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 Q8N9W7 124 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 FAM168AQ92567 244 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 MRPL27Q9P0M9 148 aaKnown RBP11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 EPDR1Q9UM22 224 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 RPH3ALQ9UNE2 315 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 IGHV7-81A0A0B4J1V7 117 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 NPFFO15130 113 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 GNG7O60262 68 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 TOMM40O96008 361 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 ZNF600Q6ZNG1 722 aa11.03□□□□□ -0.64
APOBEC3D-202ENST00000427494 ISLRO14498 428 aa11.02□□□□□ -0.65
APOBEC3D-202ENST00000427494 RNF224P0DH78 156 aa11.02□□□□□ -0.65
APOBEC3D-202ENST00000427494 MFAP4P55083 255 aa11.02□□□□□ -0.65
APOBEC3D-202ENST00000427494 IBA57Q5T440 356 aaKnown RBP11.02□□□□□ -0.65
APOBEC3D-202ENST00000427494 BAGE2Q86Y30 109 aa11.02□□□□□ -0.65
APOBEC3D-202ENST00000427494 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.65
APOBEC3D-202ENST00000427494 Q9H3A6 140 aa11.02□□□□□ -0.65
APOBEC3D-202ENST00000427494 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.65
APOBEC3D-202ENST00000427494 POLR3KQ9Y2Y1 108 aaPredicted RBP11.02□□□□□ -0.65
APOBEC3D-202ENST00000427494 TRAV30A0A087WSZ9 112 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 HLA-DRB1P01911 266 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 IL4P05112 153 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 EGR2P11161 476 aaPredicted RBP11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 UBE2G1P62253 170 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 Q56UQ5 140 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 OR8I2Q8N0Y5 310 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 OR10D4PQ8NGN7 298 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 RNF125Q96EQ8 232 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 NIT2Q9NQR4 276 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 IGHV4-61A0A0C4DH41 118 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 CENPVL3A0A0U1RRI6 287 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 H3BRN7 92 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 OR2J3O76001 311 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 NDUFB8O95169 186 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 FABP4P15090 132 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 TMEM183BQ1AE95 376 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 ZNF491Q8N8L2 437 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 C5orf17Q8NAS9 161 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 C10orf105Q8TEF2 133 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 ZNF48Q96MX3 618 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms