RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 NRTNQ99748 197 aa12.04□□□□□ -0.48
PTPN13-203ENST00000427191 TRBV7-1A0A0A6YYK4 115 aa12.04□□□□□ -0.48
PTPN13-203ENST00000427191 SPRED2Q7Z698 418 aa12.04□□□□□ -0.48
PTPN13-203ENST00000427191 FGF16O43320 207 aa12.04□□□□□ -0.48
PTPN13-203ENST00000427191 IGHV3-66A0A0C4DH42 116 aa12.04□□□□□ -0.48
PTPN13-203ENST00000427191 MORN2Q502X0 79 aa12.04□□□□□ -0.48
PTPN13-203ENST00000427191 Q5BKY6 102 aa12.04□□□□□ -0.48
PTPN13-203ENST00000427191 COLCA1Q6ZS62 124 aa12.04□□□□□ -0.48
PTPN13-203ENST00000427191 CRYBA2P53672 197 aa12.04□□□□□ -0.48
PTPN13-203ENST00000427191 ERCC8Q13216 396 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 TRGV9Q99603 122 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 GFRA4Q9GZZ7 299 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 C7orf69Q9H7B7 122 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 CEACAM1P13688 526 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 TGIF1Q15583 401 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 OR9G9P0C7N8 305 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 ACTL10Q5JWF8 245 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 SLC25A45Q8N413 288 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 GGTLC1Q9BX51 225 aa12.03□□□□□ -0.48
PTPN13-203ENST00000427191 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.48
PTPN13-203ENST00000427191 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.48
PTPN13-203ENST00000427191 ASCL4Q6XD76 172 aa12.02□□□□□ -0.48
PTPN13-203ENST00000427191 HIST3H2BBQ8N257 126 aa12.02□□□□□ -0.48
PTPN13-203ENST00000427191 CNOT1A5YKK6 2376 aaKnown RBP12.02□□□□□ -0.48
PTPN13-203ENST00000427191 IGHV3-23P01764 117 aa12.02□□□□□ -0.49
PTPN13-203ENST00000427191 BCL6BQ8N143 479 aaPredicted RBP12.02□□□□□ -0.49
PTPN13-203ENST00000427191 RNASE6Q93091 150 aaKnown RBP12.02□□□□□ -0.49
PTPN13-203ENST00000427191 IGHV3-35A0A0C4DH35 117 aa12.02□□□□□ -0.49
PTPN13-203ENST00000427191 MED12Q93074 2177 aa12.02□□□□□ -0.49
PTPN13-203ENST00000427191 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.49
PTPN13-203ENST00000427191 FNDC10F2Z333 226 aa12.02□□□□□ -0.49
PTPN13-203ENST00000427191 UMODP07911 640 aa12.02□□□□□ -0.49
PTPN13-203ENST00000427191 WNT2P09544 360 aa12.02□□□□□ -0.49
PTPN13-203ENST00000427191 BOD1L2Q8IYS8 172 aa12.02□□□□□ -0.49
PTPN13-203ENST00000427191 SRSF8Q9BRL6 282 aaKnown RBP12.02□□□□□ -0.49
PTPN13-203ENST00000427191 WFDC6Q9BQY6 131 aa12.02□□□□□ -0.49
PTPN13-203ENST00000427191 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 CDCP2Q5VXM1 449 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 C9orf139Q6ZV77 190 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 IGKV3D-20A0A0C4DH25 116 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 SPSB2Q99619 263 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 UBE2V1Q13404 147 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 A0A0G2JMM0 328 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 A0A1W2PPB8 328 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 KIR3DP1A8MWS1 328 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 ZNF48Q96MX3 618 aaPredicted RBP12.01□□□□□ -0.49
PTPN13-203ENST00000427191 ADAMTS7Q9UKP4 1686 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 OCIAD2Q56VL3 154 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 HTN3P15516 51 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 NCOR1P1Q9H4R4 102 aa12.01□□□□□ -0.49
PTPN13-203ENST00000427191 MLNRO43193 412 aa12□□□□□ -0.49
PTPN13-203ENST00000427191 MINOS1Q5TGZ0 78 aa12□□□□□ -0.49
PTPN13-203ENST00000427191 MINOS1-NBL1R4GNA1 71 aa12□□□□□ -0.49
PTPN13-203ENST00000427191 GNG5P63218 68 aa12□□□□□ -0.49
PTPN13-203ENST00000427191 RNF126Q9BV68 326 aa12□□□□□ -0.49
PTPN13-203ENST00000427191 SS18Q15532 418 aa12□□□□□ -0.49
PTPN13-203ENST00000427191 USMG5Q96IX5 58 aa12□□□□□ -0.49
PTPN13-203ENST00000427191 DUTP33316 252 aaKnown RBP12□□□□□ -0.49
PTPN13-203ENST00000427191 ID3Q02535 119 aa12□□□□□ -0.49
PTPN13-203ENST00000427191 OCC1Q8TAD7 63 aa12□□□□□ -0.49
PTPN13-203ENST00000427191 TMEM8BA6NDV4 472 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 UBE2DNLQ8IWF7 75 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 COX11Q9Y6N1 276 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 ZNF407Q9C0G0 2248 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 INSP01308 110 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 ZNF138P52744 262 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 PDE6HQ13956 83 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 LINC00114Q6XXX2 140 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 PPP1R32Q7Z5V6 425 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 TIMM21Q9BVV7 248 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 LHX2P50458 406 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 CD300EQ496F6 205 aaPredicted RBP11.99□□□□□ -0.49
PTPN13-203ENST00000427191 ANAPC10Q9UM13 185 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 MBNL3Q9NUK0 354 aaKnown RBP11.99□□□□□ -0.49
PTPN13-203ENST00000427191 BRWD3Q6RI45 1802 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 ACACAQ13085 2346 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 MUC21Q5SSG8 566 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 GUSBP1Q15486 140 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 RCHY1Q96PM5 261 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 SOCS3O14543 225 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 DLEU1O43261 78 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 PSG7Q13046 419 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 WDR83OSQ9Y284 106 aa11.99□□□□□ -0.49
PTPN13-203ENST00000427191 TRPM7Q96QT4 1865 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 SMAD7O15105 426 aaKnown RBP11.98□□□□□ -0.49
PTPN13-203ENST00000427191 EVI2AP22794 236 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 FAM216BQ8N7L0 139 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 SPINK8P0C7L1 97 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 UTF1Q5T230 341 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 D6R8Y8 96 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 PROB1E7EW31 1015 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 MUC21A0A0G2JKD1 596 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 MUC21A0A140T8X8 626 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 FAM223BA6NKX1 122 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 C1QL2Q7Z5L3 287 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 FAM223AQ8IWN6 122 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 SELLP14151 372 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 SPATA31B1PQ5VZV4 182 aa11.98□□□□□ -0.49
PTPN13-203ENST00000427191 NCKAP5O14513 1909 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms