RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 FOXL1Q12952 345 aa16.18■□□□□ 0.18
HCG18-235ENST00000426882 TMEM167AQ8TBQ9 72 aa16.18■□□□□ 0.18
HCG18-235ENST00000426882 RHOGP84095 191 aa16.18■□□□□ 0.18
HCG18-235ENST00000426882 SPSB3Q6PJ21 355 aa16.18■□□□□ 0.18
HCG18-235ENST00000426882 ERASQ7Z444 233 aa16.18■□□□□ 0.18
HCG18-235ENST00000426882 LIME1Q9H400 295 aa16.18■□□□□ 0.18
HCG18-235ENST00000426882 LGALS3P17931 250 aaKnown RBP16.18■□□□□ 0.18
HCG18-235ENST00000426882 CEACAM4O75871 244 aa16.17■□□□□ 0.18
HCG18-235ENST00000426882 TSKUQ8WUA8 353 aa16.17■□□□□ 0.18
HCG18-235ENST00000426882 SLC25A48Q6ZT89 311 aaKnown RBP16.17■□□□□ 0.18
HCG18-235ENST00000426882 ABCA4P78363 2273 aa16.17■□□□□ 0.18
HCG18-235ENST00000426882 TTC28Q96AY4 2481 aa16.17■□□□□ 0.18
HCG18-235ENST00000426882 RRN3P1Q2M238 152 aa16.17■□□□□ 0.18
HCG18-235ENST00000426882 TEX29Q8N6K0 151 aa16.17■□□□□ 0.18
HCG18-235ENST00000426882 Q6ZS92 163 aa16.17■□□□□ 0.18
HCG18-235ENST00000426882 SHANK1Q9Y566 2161 aa16.17■□□□□ 0.18
HCG18-235ENST00000426882 A0A0G2JNJ9 132 aa16.16■□□□□ 0.18
HCG18-235ENST00000426882 Q9UFV3 132 aa16.16■□□□□ 0.18
HCG18-235ENST00000426882 C19orf54Q5BKX5 351 aa16.16■□□□□ 0.18
HCG18-235ENST00000426882 NUDT10Q8NFP7 164 aa16.16■□□□□ 0.18
HCG18-235ENST00000426882 NUDT11Q96G61 164 aa16.16■□□□□ 0.18
HCG18-235ENST00000426882 H0YJW9 148 aa16.16■□□□□ 0.18
HCG18-235ENST00000426882 ATP5LO75964 103 aa16.16■□□□□ 0.18
HCG18-235ENST00000426882 KIR3DL3Q8N743 410 aa16.16■□□□□ 0.18
HCG18-235ENST00000426882 HAX1O00165 279 aa16.16■□□□□ 0.18
HCG18-235ENST00000426882 PRB4P10163 310 aaPredicted RBP16.15■□□□□ 0.18
HCG18-235ENST00000426882 PSG1P11464 419 aa16.15■□□□□ 0.18
HCG18-235ENST00000426882 FAM90A2PQ658T7 463 aa16.15■□□□□ 0.18
HCG18-235ENST00000426882 FOXC2Q99958 501 aa16.15■□□□□ 0.18
HCG18-235ENST00000426882 SLC50A1Q9BRV3 221 aa16.15■□□□□ 0.18
HCG18-235ENST00000426882 IGHV1-3A0A0C4DH29 117 aa16.15■□□□□ 0.18
HCG18-235ENST00000426882 FRMPD3Q5JV73 1810 aa16.15■□□□□ 0.18
HCG18-235ENST00000426882 TMEM50AO95807 157 aa16.14■□□□□ 0.18
HCG18-235ENST00000426882 ARL6IP6Q8N6S5 226 aa16.14■□□□□ 0.18
HCG18-235ENST00000426882 ASCL2Q99929 193 aa16.14■□□□□ 0.18
HCG18-235ENST00000426882 NUP37Q8NFH4 326 aa16.14■□□□□ 0.17
HCG18-235ENST00000426882 COX6CP09669 75 aa16.14■□□□□ 0.17
HCG18-235ENST00000426882 OR10J3Q5JRS4 329 aa16.14■□□□□ 0.17
HCG18-235ENST00000426882 TANC1Q9C0D5 1861 aa16.14■□□□□ 0.17
HCG18-235ENST00000426882 MED13LQ71F56 2210 aa16.14■□□□□ 0.17
HCG18-235ENST00000426882 PMS2P5A8MQ11 134 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 LINC00614P0C842 121 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 PEF1Q9UBV8 284 aaKnown RBP16.13■□□□□ 0.17
HCG18-235ENST00000426882 LAMTOR2Q9Y2Q5 125 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 FAM71F2Q6NXP2 309 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 SCGB3A1Q96QR1 104 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 WIPF3A6NGB9 483 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 PPP1R17O96001 155 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 WNT2P09544 360 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 PAPPA-AS1Q5QFB9 102 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 FAM169BQ8N8A8 192 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 SCRT1Q9BWW7 348 aa16.13■□□□□ 0.17
HCG18-235ENST00000426882 TGFAP01135 160 aa16.12■□□□□ 0.17
HCG18-235ENST00000426882 ADIPOQQ15848 244 aa16.12■□□□□ 0.17
HCG18-235ENST00000426882 TMEM170BQ5T4T1 132 aa16.12■□□□□ 0.17
HCG18-235ENST00000426882 UBE2L6O14933 153 aa16.12■□□□□ 0.17
HCG18-235ENST00000426882 IGKV1-16P04430 117 aa16.12■□□□□ 0.17
HCG18-235ENST00000426882 EXOC3-AS1Q8N2X6 119 aa16.12■□□□□ 0.17
HCG18-235ENST00000426882 ZNF503-AS2A6NEH8 195 aa16.12■□□□□ 0.17
HCG18-235ENST00000426882 NOTCH3Q9UM47 2321 aa16.11■□□□□ 0.17
HCG18-235ENST00000426882 LY6DQ14210 128 aa16.11■□□□□ 0.17
HCG18-235ENST00000426882 A0A1B0GWJ7 208 aa16.11■□□□□ 0.17
HCG18-235ENST00000426882 LMO1P25800 156 aa16.11■□□□□ 0.17
HCG18-235ENST00000426882 RNASE4P34096 147 aaKnown RBP16.11■□□□□ 0.17
HCG18-235ENST00000426882 MLANAQ16655 118 aa16.11■□□□□ 0.17
HCG18-235ENST00000426882 PPIFP30405 207 aaKnown RBP16.11■□□□□ 0.17
HCG18-235ENST00000426882 TRGV9Q99603 122 aa16.11■□□□□ 0.17
HCG18-235ENST00000426882 SMIM13P0DJ93 91 aa16.11■□□□□ 0.17
HCG18-235ENST00000426882 SLC25A39Q9BZJ4 359 aaPredicted RBP16.11■□□□□ 0.17
HCG18-235ENST00000426882 C19orf67A6NJJ6 358 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 KLRD1Q13241 179 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 ATP5L2Q7Z4Y8 100 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 NIT1Q86X76 327 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 TTC9CQ8N5M4 171 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 TRAV9-2A0A087WT02 112 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 GZMBP10144 247 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 PAX9P55771 341 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 KLF17Q5JT82 389 aaPredicted RBP16.1■□□□□ 0.17
HCG18-235ENST00000426882 TMEM256Q8N2U0 113 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 PYY3Q5JQD4 70 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 TPTE2P1Q5T6R2 138 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 LYPD2Q6UXB3 125 aa16.1■□□□□ 0.17
HCG18-235ENST00000426882 GEMIN7Q9H840 131 aaKnown RBP16.1■□□□□ 0.17
HCG18-235ENST00000426882 RNASE2P10153 161 aaKnown RBP16.1■□□□□ 0.17
HCG18-235ENST00000426882 DOCK10Q96BY6 2186 aa16.09■□□□□ 0.17
HCG18-235ENST00000426882 GLMPQ8WWB7 406 aa16.09■□□□□ 0.17
HCG18-235ENST00000426882 LINC00527Q9UJ94 153 aa16.09■□□□□ 0.17
HCG18-235ENST00000426882 TCRAP04437 139 aa16.09■□□□□ 0.17
HCG18-235ENST00000426882 LEPP41159 167 aa16.09■□□□□ 0.17
HCG18-235ENST00000426882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.09■□□□□ 0.171e-7■■■□□ 14.6
HCG18-235ENST00000426882 DMRTA1Q5VZB9 504 aa16.08■□□□□ 0.17
HCG18-235ENST00000426882 WDR86Q86TI4 376 aa16.08■□□□□ 0.17
HCG18-235ENST00000426882 NPIPB5A8MRT5 1133 aa16.08■□□□□ 0.17
HCG18-235ENST00000426882 CYB5R2Q6BCY4 276 aa16.08■□□□□ 0.17
HCG18-235ENST00000426882 Q6ZR03 302 aa16.08■□□□□ 0.17
HCG18-235ENST00000426882 OR5AN1Q8NGI8 311 aa16.08■□□□□ 0.17
HCG18-235ENST00000426882 SMIM12Q96EX1 92 aa16.08■□□□□ 0.17
HCG18-235ENST00000426882 ACTL10Q5JWF8 245 aa16.08■□□□□ 0.16
HCG18-235ENST00000426882 RNF5Q99942 180 aa16.08■□□□□ 0.16
HCG18-235ENST00000426882 CRIM1Q9NZV1 1036 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms