RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 EWSR1Q01844 656 aaKnown RBP eCLIP18.49■□□□□ 0.553e-7■■■□□ 16.8
VEGFA-209ENST00000425836 OR51G1Q8NGK1 321 aa18.49■□□□□ 0.55
VEGFA-209ENST00000425836 OR2K2Q8NGT1 345 aa18.49■□□□□ 0.55
VEGFA-209ENST00000425836 HBG1P69891 147 aa18.48■□□□□ 0.55
VEGFA-209ENST00000425836 HBG2P69892 147 aa18.48■□□□□ 0.55
VEGFA-209ENST00000425836 OR2F1Q13607 317 aa18.48■□□□□ 0.55
VEGFA-209ENST00000425836 Q5BKY6 102 aa18.48■□□□□ 0.55
VEGFA-209ENST00000425836 THAP6Q8TBB0 222 aa18.48■□□□□ 0.55
VEGFA-209ENST00000425836 RHPN1-AS1Q9BWJ2 59 aa18.48■□□□□ 0.55
VEGFA-209ENST00000425836 AURKAIP1Q9NWT8 199 aaPredicted RBP18.48■□□□□ 0.55
VEGFA-209ENST00000425836 ZNF256Q9Y2P7 627 aaPredicted RBP18.48■□□□□ 0.55
VEGFA-209ENST00000425836 WI2-2373I1.2A0A1W2PRP0 233 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 CHEK1O14757 476 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 APOHP02749 345 aaPredicted RBP18.47■□□□□ 0.55
VEGFA-209ENST00000425836 NPPCP23582 126 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 RAP2BP61225 183 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 USF2Q15853 346 aaPredicted RBP18.47■□□□□ 0.55
VEGFA-209ENST00000425836 Q6ZNX1 250 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 TMEM182Q6ZP80 229 aaPredicted RBP18.47■□□□□ 0.55
VEGFA-209ENST00000425836 LILRB2Q8N423 598 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 CHAC2Q8WUX2 184 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 METTL26Q96S19 204 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 DNAH3Q8TD57 4116 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 IGHV3OR16-13A0A075B7E8 117 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 IGHV3-74A0A0B4J1X5 117 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 CRYBB3P26998 211 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 VWC2Q2TAL6 325 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 LCN12Q6JVE5 192 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 TEPPQ6URK8 271 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 UQCC1Q9NVA1 299 aa18.47■□□□□ 0.55
VEGFA-209ENST00000425836 LSM4Q9Y4Z0 139 aaKnown RBP18.47■□□□□ 0.55
VEGFA-209ENST00000425836 BAXQ07812 192 aa18.46■□□□□ 0.55
VEGFA-209ENST00000425836 FGL1Q08830 312 aa18.46■□□□□ 0.55
VEGFA-209ENST00000425836 ATP6V1FQ16864 119 aa18.46■□□□□ 0.55
VEGFA-209ENST00000425836 CYP2G1PQ6ZSU1 146 aa18.46■□□□□ 0.55
VEGFA-209ENST00000425836 RNF125Q96EQ8 232 aa18.46■□□□□ 0.55
VEGFA-209ENST00000425836 PRR25Q96S07 402 aa18.46■□□□□ 0.55
VEGFA-209ENST00000425836 TMEM147Q9BVK8 224 aa18.46■□□□□ 0.55
VEGFA-209ENST00000425836 GATA2P23769 480 aaPredicted RBP18.45■□□□□ 0.54
VEGFA-209ENST00000425836 TMEM61Q8N0U2 210 aa18.45■□□□□ 0.54
VEGFA-209ENST00000425836 ST8SIA2Q92186 375 aa18.45■□□□□ 0.54
VEGFA-209ENST00000425836 VSIRQ9H7M9 311 aa18.45■□□□□ 0.54
VEGFA-209ENST00000425836 IGHV3-66A0A0C4DH42 116 aa18.44■□□□□ 0.54
VEGFA-209ENST00000425836 GP9P14770 177 aa18.44■□□□□ 0.54
VEGFA-209ENST00000425836 RPL12P30050 165 aaKnown RBP18.44■□□□□ 0.54
VEGFA-209ENST00000425836 OR5C1Q8NGR4 320 aa18.44■□□□□ 0.54
VEGFA-209ENST00000425836 RNF2Q99496 336 aa18.44■□□□□ 0.54
VEGFA-209ENST00000425836 PBDC1Q9BVG4 233 aa18.44■□□□□ 0.54
VEGFA-209ENST00000425836 U3KQE9 123 aa18.44■□□□□ 0.54
VEGFA-209ENST00000425836 ZNF785A8K8V0 405 aa18.43■□□□□ 0.54
VEGFA-209ENST00000425836 HNRNPCP07910 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
VEGFA-209ENST00000425836 LYZP61626 148 aa18.43■□□□□ 0.54
VEGFA-209ENST00000425836 BPIFCQ8NFQ6 507 aa18.43■□□□□ 0.54
VEGFA-209ENST00000425836 OR2T35Q8NGX2 323 aa18.43■□□□□ 0.54
VEGFA-209ENST00000425836 WDR83OSQ9Y284 106 aa18.43■□□□□ 0.54
VEGFA-209ENST00000425836 HSPB11Q9Y547 144 aa18.43■□□□□ 0.54
VEGFA-209ENST00000425836 CFDP00746 253 aaPredicted RBP18.42■□□□□ 0.54
VEGFA-209ENST00000425836 RABAC1Q9UI14 185 aa18.42■□□□□ 0.54
VEGFA-209ENST00000425836 TRAV25A0A0B4J276 109 aa18.42■□□□□ 0.54
VEGFA-209ENST00000425836 A0A1W2PS18 150 aa18.42■□□□□ 0.54
VEGFA-209ENST00000425836 BMI1P35226 326 aa18.42■□□□□ 0.54
VEGFA-209ENST00000425836 RBPMS2Q6ZRY4 209 aaKnown RBP18.42■□□□□ 0.54
VEGFA-209ENST00000425836 MGST2Q99735 147 aa18.42■□□□□ 0.54
VEGFA-209ENST00000425836 UBE2L5PA0A1B0GUS4 154 aa18.41■□□□□ 0.54
VEGFA-209ENST00000425836 AGPAT2O15120 278 aa18.41■□□□□ 0.54
VEGFA-209ENST00000425836 SELENOTP62341 195 aa18.41■□□□□ 0.54
VEGFA-209ENST00000425836 CLINT1Q14677 625 aa18.41■□□□□ 0.54
VEGFA-209ENST00000425836 LAMTOR1Q6IAA8 161 aa18.41■□□□□ 0.54
VEGFA-209ENST00000425836 NARS2Q96I59 477 aaKnown RBP18.41■□□□□ 0.54
VEGFA-209ENST00000425836 SLC45A2Q9UMX9 530 aa18.41■□□□□ 0.54
VEGFA-209ENST00000425836 G3V3Q6 166 aa18.4■□□□□ 0.54
VEGFA-209ENST00000425836 K7EIL1 84 aa18.4■□□□□ 0.54
VEGFA-209ENST00000425836 EIF2B2P49770 351 aaKnown RBP18.4■□□□□ 0.54
VEGFA-209ENST00000425836 GUCA2BQ16661 112 aa18.4■□□□□ 0.54
VEGFA-209ENST00000425836 FAM90A2PQ658T7 463 aa18.4■□□□□ 0.54
VEGFA-209ENST00000425836 TMEM231Q9H6L2 316 aa18.4■□□□□ 0.54
VEGFA-209ENST00000425836 MEGF8Q7Z7M0 2845 aa18.4■□□□□ 0.54
VEGFA-209ENST00000425836 DFFBO76075 338 aa18.39■□□□□ 0.53
VEGFA-209ENST00000425836 STPG3Q8N7X2 389 aa18.39■□□□□ 0.53
VEGFA-209ENST00000425836 TSPAN4O14817 238 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 ORM2P19652 201 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 CAMLGP49069 296 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 RAB31Q13636 194 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 TCF24Q7RTU0 167 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 ZNF546Q86UE3 836 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 BUB3O43684 328 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 LINC00869P0C866 280 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 GRAMD2BQ96HH9 432 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 GGTLC1Q9BX51 225 aa18.38■□□□□ 0.53
VEGFA-209ENST00000425836 CD5P06127 495 aa18.37■□□□□ 0.53
VEGFA-209ENST00000425836 FGF7P21781 194 aa18.37■□□□□ 0.53
VEGFA-209ENST00000425836 PLP1P60201 277 aa18.37■□□□□ 0.53
VEGFA-209ENST00000425836 C16orf54Q6UWD8 224 aa18.37■□□□□ 0.53
VEGFA-209ENST00000425836 OR1B1Q8NGR6 318 aa18.37■□□□□ 0.53
VEGFA-209ENST00000425836 AQP10Q96PS8 301 aa18.37■□□□□ 0.53
VEGFA-209ENST00000425836 ATP5SQ99766 215 aa18.37■□□□□ 0.53
VEGFA-209ENST00000425836 SMIM3Q9BZL3 60 aa18.37■□□□□ 0.53
VEGFA-209ENST00000425836 FXYD6-FXYD2A0A087WZ82 144 aa18.36■□□□□ 0.53
VEGFA-209ENST00000425836 SMLR1H3BR10 107 aa18.36■□□□□ 0.53
VEGFA-209ENST00000425836 SPAG8Q99932 426 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms