RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 OR8B2Q96RD0 313 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 GSX1Q9H4S2 264 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 EPDR1Q9UM22 224 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 OTOGLQ3ZCN5 2332 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 NBEAP1P0C6P0 100 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 LYPD2Q6UXB3 125 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 MBD6Q96DN6 1003 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 ALKBH7Q9BT30 221 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 IGKV1D-37A0A075B6S9 117 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 CGB1A6NKQ9 187 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 TNFRSF1AP19438 455 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 TSPOP30536 169 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 DLX1P56177 255 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 C21orf62-AS1Q17RA5 79 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 TMEM177Q53S58 311 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 C1orf185Q5T7R7 199 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 UNQ5815/PRO19632Q6UWF5 114 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 VSTM2AQ8TAG5 236 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 TMEM167AQ8TBQ9 72 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 DAZAP1Q96EP5 407 aaKnown RBP6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 ASCL3Q9NQ33 180 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 MRPL27Q9P0M9 148 aaKnown RBP6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 ZNF318Q5VUA4 2279 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 A0A1W2PPI3 338 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 H0Y8G0 127 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 NDUFB8O95169 186 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 FAM87AP0C7U9 286 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 PTTG1IPP53801 180 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 LINC00322Q6ZN03 302 aaPredicted RBP6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 LINC00574Q9H8X3 128 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 PPIAL4EA0A075B759 164 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 C20orf202A1L168 122 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 PPIAL4DF5H284 164 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 NDUFB3O43676 98 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 LINC00614P0C842 121 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 PPIAL4FP0DN26 164 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 IGLL1P15814 213 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 VMA21Q3ZAQ7 101 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 FAM231DQ6ZW35 169 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 PERPQ96FX8 193 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 CHRDL1Q9BU40 450 aa6.06□□□□□ -1.44
SMARCC1-202ENST00000425518 TRAV9-2A0A087WT02 112 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 C22orf46C9J442 243 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 P01737 135 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 SSX8Q7RTT4 187 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 GPR82Q96P67 336 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 RBM14Q96PK6 669 aaKnown RBP6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 TP73-AS1Q9UF72 201 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 WASHC3Q9Y3C0 194 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 DYSFO75923 2080 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 TRAV8-1A0A0A6YYK1 113 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 C17orf100A8MU93 164 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 TEX36Q5VZQ5 186 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 TMEM108Q6UXF1 575 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 WIPF2Q8TF74 440 aaPredicted RBP6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 MCRIP2Q9BUT9 160 aaKnown RBP6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 TANC2Q9HCD6 1990 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 K7EM74 188 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 FCN3O75636 299 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 ZNF138P52744 262 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 HBBP68871 147 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 MEF2CQ06413 473 aaPredicted RBP6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 TMEM30BQ3MIR4 351 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 RASL11AQ6T310 242 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 LINC00173Q6ZV60 143 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 ERASQ7Z444 233 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 C22orf15Q8WYQ4 148 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 ASCL2Q99929 193 aa6.05□□□□□ -1.44
SMARCC1-202ENST00000425518 MALRD1Q5VYJ5 2156 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 A8MWL6 223 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 CSN3P07498 182 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 CNTFRP26992 372 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 LRRC10Q5BKY1 277 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 SPATA12Q7Z6I5 190 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 OR8B3Q8NGG8 313 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 ZNF596Q8TC21 504 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 RPP21Q9H633 154 aaKnown RBP6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 DSCAML1Q8TD84 2053 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 IGLV2-23P01705 113 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 LYZP61626 148 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 ADIPOQQ15848 244 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 STXBP6Q8NFX7 210 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 TMEM186Q96B77 213 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 TMEM70Q9BUB7 260 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 C2orf70A6NJV1 201 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 CHEK1O14757 476 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 FSTL3O95633 263 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 KLF5Q13887 457 aaPredicted RBP6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 THAP8Q8NA92 274 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 GTSF1Q8WW33 167 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 Q9H3A6 140 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 CBY1Q9Y3M2 126 aa6.04□□□□□ -1.44
SMARCC1-202ENST00000425518 DMXL1Q9Y485 3027 aa6.03□□□□□ -1.44
SMARCC1-202ENST00000425518 NBASA2RRP1 2371 aa6.03□□□□□ -1.44
SMARCC1-202ENST00000425518 ABCA4P78363 2273 aa6.03□□□□□ -1.44
SMARCC1-202ENST00000425518 ZGRF1Q86YA3 2104 aa6.03□□□□□ -1.44
SMARCC1-202ENST00000425518 OR4C46A6NHA9 309 aa6.03□□□□□ -1.44
SMARCC1-202ENST00000425518 CCL25O15444 150 aa6.03□□□□□ -1.44
SMARCC1-202ENST00000425518 CRYABP02511 175 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-202ENST00000425518 SFTPCP11686 197 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms