RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 UQCC1Q9NVA1 299 aa12.9□□□□□ -0.34
FOXN4-203ENST00000423960 OR51G1Q8NGK1 321 aa12.89□□□□□ -0.35
FOXN4-203ENST00000423960 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
FOXN4-203ENST00000423960 TMEM147Q9BVK8 224 aa12.89□□□□□ -0.35
FOXN4-203ENST00000423960 TECRQ9NZ01 308 aaKnown RBP12.89□□□□□ -0.35
FOXN4-203ENST00000423960 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
FOXN4-203ENST00000423960 SMPXQ9UHP9 88 aa12.89□□□□□ -0.35
FOXN4-203ENST00000423960 PRKDCP78527 4128 aaKnown RBP12.89□□□□□ -0.35
FOXN4-203ENST00000423960 TGP01266 2768 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 WI2-2373I1.2A0A1W2PRP0 233 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 IGLV1-51P01701 117 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 IL4P05112 153 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 NPPCP23582 126 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 OR2F1Q13607 317 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 VWC2Q2TAL6 325 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 CYP2G1PQ6ZSU1 146 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 OR5C1Q8NGR4 320 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 HSPB11Q9Y547 144 aa12.88□□□□□ -0.35
FOXN4-203ENST00000423960 IGHV7-4-1A0A0J9YVY3 117 aa12.87□□□□□ -0.35
FOXN4-203ENST00000423960 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
FOXN4-203ENST00000423960 NUP62P37198 522 aaPredicted RBP12.87□□□□□ -0.35
FOXN4-203ENST00000423960 EGFEM1PQ0D2K5 195 aa12.87□□□□□ -0.35
FOXN4-203ENST00000423960 RAB31Q13636 194 aa12.87□□□□□ -0.35
FOXN4-203ENST00000423960 DEFB114Q30KQ6 69 aa12.87□□□□□ -0.35
FOXN4-203ENST00000423960 KPRPQ5T749 579 aaPredicted RBP12.87□□□□□ -0.35
FOXN4-203ENST00000423960 METTL26Q96S19 204 aa12.87□□□□□ -0.35
FOXN4-203ENST00000423960 MLXQ9UH92 298 aa12.87□□□□□ -0.35
FOXN4-203ENST00000423960 LSM4Q9Y4Z0 139 aaKnown RBP12.87□□□□□ -0.35
FOXN4-203ENST00000423960 hCG_2014768A0A024R1R8 64 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 IGHV3-49A0A0A0MS15 119 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 GATA2P23769 480 aaPredicted RBP12.86□□□□□ -0.35
FOXN4-203ENST00000423960 CRYBB3P26998 211 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 KRTAP10-11P60412 298 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 SELENOTP62341 195 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 CLINT1Q14677 625 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 TMEM182Q6ZP80 229 aaPredicted RBP12.86□□□□□ -0.35
FOXN4-203ENST00000423960 ZNF546Q86UE3 836 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 BPIFCQ8NFQ6 507 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 OR2K2Q8NGT1 345 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 RNF125Q96EQ8 232 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 RHPN1-AS1Q9BWJ2 59 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 WDR83OSQ9Y284 106 aa12.86□□□□□ -0.35
FOXN4-203ENST00000423960 FXYD6-FXYD2A0A087WZ82 144 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 UBE2L5PA0A1B0GUS4 154 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 CHEK1O14757 476 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 APOHP02749 345 aaPredicted RBP12.85□□□□□ -0.35
FOXN4-203ENST00000423960 BMI1P35226 326 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 LYZP61626 148 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 USF2Q15853 346 aaPredicted RBP12.85□□□□□ -0.35
FOXN4-203ENST00000423960 CD300EQ496F6 205 aaPredicted RBP12.85□□□□□ -0.35
FOXN4-203ENST00000423960 BTNL8Q6UX41 500 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 INO80EQ8NBZ0 244 aaPredicted RBP12.85□□□□□ -0.35
FOXN4-203ENST00000423960 NARS2Q96I59 477 aaKnown RBP12.85□□□□□ -0.35
FOXN4-203ENST00000423960 AQP10Q96PS8 301 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 PBDC1Q9BVG4 233 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 RABAC1Q9UI14 185 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 SELENOKQ9Y6D0 94 aa12.85□□□□□ -0.35
FOXN4-203ENST00000423960 IGHV3OR16-13A0A075B7E8 117 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 IGHV3-74A0A0B4J1X5 117 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 A0A1W2PS18 150 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 G3V3Q6 166 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 SMLR1H3BR10 107 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 AGPAT2O15120 278 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 HNRNPCP07910 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
FOXN4-203ENST00000423960 CAMLGP49069 296 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 LCN12Q6JVE5 192 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 MGST2Q99735 147 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 SMIM3Q9BZL3 60 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 TMEM231Q9H6L2 316 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 VSIRQ9H7M9 311 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 SLC45A2Q9UMX9 530 aa12.84□□□□□ -0.35
FOXN4-203ENST00000423960 DFFBO76075 338 aa12.83□□□□□ -0.36
FOXN4-203ENST00000423960 FGF7P21781 194 aa12.83□□□□□ -0.36
FOXN4-203ENST00000423960 ST8SIA2Q92186 375 aa12.83□□□□□ -0.36
FOXN4-203ENST00000423960 ATP5SQ99766 215 aa12.83□□□□□ -0.36
FOXN4-203ENST00000423960 PFDN2Q9UHV9 154 aa12.83□□□□□ -0.36
FOXN4-203ENST00000423960 TNFSF18Q9UNG2 199 aa12.83□□□□□ -0.36
FOXN4-203ENST00000423960 U3KQE9 123 aa12.83□□□□□ -0.36
FOXN4-203ENST00000423960 IGHV3-66A0A0C4DH42 116 aa12.82□□□□□ -0.36
FOXN4-203ENST00000423960 IZUMO1RA6ND01 250 aa12.82□□□□□ -0.36
FOXN4-203ENST00000423960 MPDU1O75352 247 aa12.82□□□□□ -0.36
FOXN4-203ENST00000423960 ORM2P19652 201 aa12.82□□□□□ -0.36
FOXN4-203ENST00000423960 EIF2B2P49770 351 aaKnown RBP12.82□□□□□ -0.36
FOXN4-203ENST00000423960 LAMTOR1Q6IAA8 161 aa12.82□□□□□ -0.36
FOXN4-203ENST00000423960 RBPMS2Q6ZRY4 209 aaKnown RBP12.82□□□□□ -0.36
FOXN4-203ENST00000423960 ST6GAL2Q96JF0 529 aa12.82□□□□□ -0.36
FOXN4-203ENST00000423960 RNF2Q99496 336 aa12.82□□□□□ -0.36
FOXN4-203ENST00000423960 ZNF256Q9Y2P7 627 aaPredicted RBP12.82□□□□□ -0.36
FOXN4-203ENST00000423960 DNAH3Q8TD57 4116 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 TRAV25A0A0B4J276 109 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 A0A1B0GVG6 124 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 HYPMO75409 117 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 IFNA5P01569 189 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 LINC00869P0C866 280 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 PLP1P60201 277 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 OR1B1Q8NGR6 318 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 GRAMD2BQ96HH9 432 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 GGTLC1Q9BX51 225 aa12.81□□□□□ -0.36
FOXN4-203ENST00000423960 WDR61Q9GZS3 305 aaKnown RBP12.81□□□□□ -0.36
FOXN4-203ENST00000423960 WFDC1Q9HC57 220 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms