RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PFDN2Q9UHV9 154 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 RBMY1BA6NDE4 496 aaKnown RBP8.16□□□□□ -1.1
USP49-204ENST00000423567 RBMY1EA6NEQ0 496 aaKnown RBP8.16□□□□□ -1.1
USP49-204ENST00000423567 HELTA6NFD8 242 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 FAM25EA8MYX2 175 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 SSSCA1O60232 199 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 UPK1BO75841 260 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 APOHP02749 345 aaPredicted RBP8.16□□□□□ -1.1
USP49-204ENST00000423567 RBMY1DP0C7P1 496 aaKnown RBP8.16□□□□□ -1.1
USP49-204ENST00000423567 NUP62P37198 522 aaPredicted RBP8.16□□□□□ -1.1
USP49-204ENST00000423567 P2RY1P47900 373 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 POLR2GP62487 172 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP49-204ENST00000423567 LINC00322Q6ZN03 302 aaPredicted RBP8.16□□□□□ -1.1
USP49-204ENST00000423567 WFDC3Q8IUB2 231 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 GBGT1Q8N5D6 347 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 OR51G1Q8NGK1 321 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 OR4D5Q8NGN0 318 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 ZNF431Q8TF32 576 aaPredicted RBP8.16□□□□□ -1.1
USP49-204ENST00000423567 PSENENQ9NZ42 101 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 RABAC1Q9UI14 185 aa8.16□□□□□ -1.1
USP49-204ENST00000423567 TRAV2A0A0B4J234 112 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 MPTX1A8MV57 137 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 H3BP45 60 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 PSG1P11464 419 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 AP2S1P53680 142 aaPredicted RBP8.15□□□□□ -1.1
USP49-204ENST00000423567 APOC4P55056 127 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 AKR1C1Q04828 323 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 ODF3L2Q3SX64 289 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 FAM90A2PQ658T7 463 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 C12orf45Q8N5I9 185 aaPredicted RBP8.15□□□□□ -1.1
USP49-204ENST00000423567 ZBTB8BQ8NAP8 495 aaPredicted RBP8.15□□□□□ -1.1
USP49-204ENST00000423567 STXBP6Q8NFX7 210 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 RAB40CQ96S21 281 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 SEC22CQ9BRL7 303 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 PBDC1Q9BVG4 233 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 MS4A6AQ9H2W1 248 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 TBC1D24Q9ULP9 559 aa8.15□□□□□ -1.1
USP49-204ENST00000423567 SMCO3A2RU48 225 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 C5orf51A6NDU8 294 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 SNRPGP15A8MWD9 76 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 L7N2F9 121 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 CFDP00746 253 aaPredicted RBP8.14□□□□□ -1.11
USP49-204ENST00000423567 DEFA1P59665 94 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 DEFA3P59666 94 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 VAMP2P63027 116 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 USF2Q15853 346 aaPredicted RBP8.14□□□□□ -1.11
USP49-204ENST00000423567 LILRB2Q8N423 598 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 RNF125Q96EQ8 232 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 SMIM8Q96KF7 97 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 TRGV9Q99603 122 aa8.14□□□□□ -1.11
USP49-204ENST00000423567 GPN1Q9HCN4 374 aaPredicted RBP8.14□□□□□ -1.11
USP49-204ENST00000423567 CCSO14618 274 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 S100A7P31151 101 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 TAS2R30P59541 319 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 LYZP61626 148 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 ZNF90Q03938 601 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 OR8G2PQ6IF36 304 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 C16orf54Q6UWD8 224 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 ACOT7LQ6ZUV0 252 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 APRG1Q8IVJ8 170 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 STPG3Q8N7X2 389 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 PPP1R14BQ96C90 147 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 CITED4Q96RK1 184 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 MAP6D1Q9H9H5 199 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 U3KQE9 123 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 COL7A1Q02388 2944 aa8.13□□□□□ -1.11
USP49-204ENST00000423567 IGKV1D-37A0A075B6S9 117 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 C3orf84H3BNL1 204 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 UBE2CO00762 179 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 TSC22D2O75157 780 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 IL5P05113 134 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 RPL35AP18077 110 aaKnown RBP8.12□□□□□ -1.11
USP49-204ENST00000423567 PVALBP20472 110 aaPredicted RBP8.12□□□□□ -1.11
USP49-204ENST00000423567 OR2F1Q13607 317 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 GSG1LQ6UXU4 331 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 THAP8Q8NA92 274 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 BPIFCQ8NFQ6 507 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 OR10P1Q8NGE3 313 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 RETNQ9HD89 108 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 MGAT4CQ9UBM8 478 aa8.12□□□□□ -1.11
USP49-204ENST00000423567 LSM5Q9Y4Y9 91 aaKnown RBP8.12□□□□□ -1.11
USP49-204ENST00000423567 KIR2DL5BA0A0G2JN68 375 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 KIR2DL5BA0A0G2JPC4 375 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 PRSS46E5RG02 174 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 BUB3O43684 328 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 PRAF2O60831 178 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
USP49-204ENST00000423567 METTL15P1P0C7V9 234 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 BCAP31P51572 246 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 DEFB131AP59861 70 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 TMEM14EPQ6UXP3 125 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 SIGLEC15Q6ZMC9 328 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 TMEM144Q7Z5S9 345 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 KIR2DL5AQ8N109 375 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 KIR2DL5BQ8NHK3 375 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 MUC7Q8TAX7 377 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 GLMPQ8WWB7 406 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 C2orf50Q96LR7 162 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 FBXL17Q9UF56 701 aa8.11□□□□□ -1.11
USP49-204ENST00000423567 RCL1Q9Y2P8 373 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms