RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TMEM238C9JI98 176 aa10.21□□□□□ -0.78
CLCN4-203ENST00000421085 PSG3Q16557 428 aa10.21□□□□□ -0.78
CLCN4-203ENST00000421085 CHD5Q8TDI0 1954 aa10.21□□□□□ -0.78
CLCN4-203ENST00000421085 IGHV2-70P01814 119 aa10.21□□□□□ -0.78
CLCN4-203ENST00000421085 HIST1H4AP62805 103 aaKnown RBP10.21□□□□□ -0.78
CLCN4-203ENST00000421085 LHX2P50458 406 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 STPG1Q5TH74 334 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 LY96Q9Y6Y9 160 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.2□□□□□ -0.78
CLCN4-203ENST00000421085 CRYGSP22914 178 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 ATP5J2P56134 94 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 C5orf24Q7Z6I8 188 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 PTPRZ1P23471 2315 aaPredicted RBP10.2□□□□□ -0.78
CLCN4-203ENST00000421085 TCRAP04437 139 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 DEFB104AQ8WTQ1 72 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 GFRA3O60609 400 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 C2orf82Q6UX34 121 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 SCRT1Q9BWW7 348 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 EDA2RQ9HAV5 297 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 TRGV2A0A075B6R0 118 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 FAM166AQ6J272 317 aa10.2□□□□□ -0.78
CLCN4-203ENST00000421085 A0A1B0GUS0 222 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 C17orf100A8MU93 164 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 NPSP0C0P6 89 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 RNF144BQ7Z419 303 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 MYOFQ9NZM1 2061 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 GBF1Q92538 1859 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 ZIC4Q8N9L1 334 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 WFDC12Q8WWY7 111 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 IMMP1LQ96LU5 166 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 TMEM133Q9H2Q1 129 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 MALP21145 153 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 FOXF2Q12947 444 aa10.19□□□□□ -0.78
CLCN4-203ENST00000421085 TRAV3A0A0B4J244 114 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 C10orf55Q5SWW7 151 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 C20orf144Q9BQM9 153 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 MRPS18CQ9Y3D5 142 aaKnown RBP10.18□□□□□ -0.78
CLCN4-203ENST00000421085 NTF4P34130 210 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 SPSB3Q6PJ21 355 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 ZNF562Q6V9R5 426 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 FLVCR1-AS1Q8TAF5 88 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 CACNA1DQ01668 2161 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 CHAC1Q9BUX1 264 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 RHOGP84095 191 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 SLC25A39Q9BZJ4 359 aaPredicted RBP10.18□□□□□ -0.78
CLCN4-203ENST00000421085 ARID2Q68CP9 1835 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 RBBP6Q7Z6E9 1792 aaKnown RBP10.18□□□□□ -0.78
CLCN4-203ENST00000421085 FAM231BA6NCW3 169 aa10.18□□□□□ -0.78
CLCN4-203ENST00000421085 SMAD7O15105 426 aaKnown RBP10.17□□□□□ -0.78
CLCN4-203ENST00000421085 LCNL1Q6ZST4 164 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 GHRHP01286 108 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 QRFPP83859 136 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 C9orf106Q8NAJ2 232 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 TMEM8BA6NDV4 472 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 EPOPA6NHQ4 379 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 ZC2HC1BQ5TFG8 222 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 DOCK4Q8N1I0 1966 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 IGLV3-32A0A0A0MS00 114 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 UCNP55089 124 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 TMEM167AQ8TBQ9 72 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 TMEM158Q8WZ71 300 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 TMEM249Q2WGJ8 235 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 COL4A5P29400 1685 aa10.17□□□□□ -0.78
CLCN4-203ENST00000421085 SH2D1AO60880 128 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 LINC00158P58513 81 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 STPG4Q8N801 248 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 CCL19Q99731 98 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 Q0VG73 95 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 MORN3Q6PF18 240 aaPredicted RBP10.16□□□□□ -0.78
CLCN4-203ENST00000421085 LGALS1P09382 135 aaKnown RBP10.16□□□□□ -0.78
CLCN4-203ENST00000421085 COX6B1P14854 86 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 NABP1Q96AH0 204 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 LINC01549A6NIU2 74 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 PRR19A6NJB7 356 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 SMKR1H3BMG3 65 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 RPL15P61313 204 aaKnown RBP10.16□□□□□ -0.78
CLCN4-203ENST00000421085 MRPL14Q6P1L8 145 aaKnown RBP10.16□□□□□ -0.78
CLCN4-203ENST00000421085 ZCCHC24Q8N2G6 241 aaKnown RBP10.16□□□□□ -0.78
CLCN4-203ENST00000421085 C5orf63A6NC05 138 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 PHLDA1Q8WV24 401 aaPredicted RBP10.16□□□□□ -0.78
CLCN4-203ENST00000421085 ZNF581Q9P0T4 197 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 SVILO95425 2214 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 PATJQ8NI35 1801 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 FAM57AQ8TBR7 257 aa10.16□□□□□ -0.78
CLCN4-203ENST00000421085 ZNF48Q96MX3 618 aaPredicted RBP10.16□□□□□ -0.78
CLCN4-203ENST00000421085 TP53BP1Q12888 1972 aaPredicted RBP10.15□□□□□ -0.78
CLCN4-203ENST00000421085 A0A0G2JRQ6 117 aa10.15□□□□□ -0.78
CLCN4-203ENST00000421085 EFNA2O43921 213 aa10.15□□□□□ -0.78
CLCN4-203ENST00000421085 LILRA1O75019 489 aa10.15□□□□□ -0.78
CLCN4-203ENST00000421085 NYNRINQ9P2P1 1898 aaKnown RBP10.15□□□□□ -0.78
CLCN4-203ENST00000421085 SRD5A1P18405 259 aa10.15□□□□□ -0.78
CLCN4-203ENST00000421085 KIF26BQ2KJY2 2108 aa10.15□□□□□ -0.78
CLCN4-203ENST00000421085 POLR2AP24928 1970 aaKnown RBP10.15□□□□□ -0.78
CLCN4-203ENST00000421085 TIMM23O14925 209 aa10.15□□□□□ -0.78
CLCN4-203ENST00000421085 PSPNO60542 156 aa10.15□□□□□ -0.78
CLCN4-203ENST00000421085 SIGLEC15Q6ZMC9 328 aa10.15□□□□□ -0.78
CLCN4-203ENST00000421085 PLEKHB2Q96CS7 222 aa10.15□□□□□ -0.78
CLCN4-203ENST00000421085 RALGAPA1Q6GYQ0 2036 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms