RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 A0A1W2PRD5 423 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 A0A1W2PRF3 423 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 A0A1W2PRM7 423 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 SPINK4O60575 86 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 NDUFS7O75251 213 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 HYPMO75409 117 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 CA1P00915 261 aaPredicted RBP12.82□□□□□ -0.36
CTSB-203ENST00000420692 GP9P14770 177 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 TCL1AP56279 114 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 CX3CL1P78423 397 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 IBA57Q5T440 356 aaKnown RBP12.82□□□□□ -0.36
CTSB-203ENST00000420692 OR5R1Q8NH85 324 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 BLNKQ8WV28 456 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 TIMD4Q96H15 378 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 SSBP3Q9BWW4 388 aaPredicted RBP12.82□□□□□ -0.36
CTSB-203ENST00000420692 SMIM27A0A1W2PRY6 76 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 CORTO00230 105 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 PSG1P11464 419 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 PRTN3P24158 256 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 SLC35B1P78383 322 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 MMDQ15546 238 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 DTX2Q86UW9 622 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 DYNAPQ8N1N2 210 aa12.82□□□□□ -0.36
CTSB-203ENST00000420692 NEU4Q8WWR8 484 aaPredicted RBP12.82□□□□□ -0.36
CTSB-203ENST00000420692 H3BTX0 84 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 K7EIM0 57 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 IGKV1-17P01599 117 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 PLGLAQ15195 96 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 MBD6Q96DN6 1003 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 C7orf69Q9H7B7 122 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 F2Z2F3 143 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 M0R1W7 72 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 NBEAP1P0C6P0 100 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 ZFP36P26651 326 aaKnown RBP12.81□□□□□ -0.36
CTSB-203ENST00000420692 NPBQ8NG41 125 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 C22orf15Q8WYQ4 148 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 TMEM18Q96B42 140 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 FAM103A1Q9BTL3 118 aaKnown RBP12.81□□□□□ -0.36
CTSB-203ENST00000420692 EPDR1Q9UM22 224 aa12.81□□□□□ -0.36
CTSB-203ENST00000420692 SNURFLB1AK76 121 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 NBR2O15453 112 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 NDUFA3O95167 84 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 SSX2Q16385 188 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 BAGE2Q86Y30 109 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 SGK494Q96LW2 274 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 PRO1933Q9H354 126 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 PGPA6NDG6 321 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 TMEM136Q6ZRR5 245 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 STXBP6Q8NFX7 210 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 GNB1LQ9BYB4 327 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 KLF12Q9Y4X4 402 aa12.8□□□□□ -0.36
CTSB-203ENST00000420692 VPS13CQ709C8 3753 aa12.79□□□□□ -0.36
CTSB-203ENST00000420692 CNIH1O95406 144 aa12.79□□□□□ -0.36
CTSB-203ENST00000420692 CDKN1AP38936 164 aa12.79□□□□□ -0.36
CTSB-203ENST00000420692 TMEM183BQ1AE95 376 aa12.79□□□□□ -0.36
CTSB-203ENST00000420692 KLF17Q5JT82 389 aaPredicted RBP12.79□□□□□ -0.36
CTSB-203ENST00000420692 UNQ6494/PRO21346Q6UXR6 183 aa12.79□□□□□ -0.36
CTSB-203ENST00000420692 SRSF8Q9BRL6 282 aaKnown RBP12.79□□□□□ -0.36
CTSB-203ENST00000420692 FAM209BQ5JX69 171 aa12.78□□□□□ -0.36
CTSB-203ENST00000420692 NUDT10Q8NFP7 164 aa12.78□□□□□ -0.36
CTSB-203ENST00000420692 NUDT11Q96G61 164 aa12.78□□□□□ -0.36
CTSB-203ENST00000420692 SERTAD4Q9NUC0 356 aa12.78□□□□□ -0.36
CTSB-203ENST00000420692 ZNF705GA8MUZ8 300 aaPredicted RBP12.78□□□□□ -0.36
CTSB-203ENST00000420692 SLC25A5P05141 298 aaKnown RBP12.78□□□□□ -0.36
CTSB-203ENST00000420692 PAX1P15863 534 aa12.78□□□□□ -0.36
CTSB-203ENST00000420692 LYZP61626 148 aa12.78□□□□□ -0.36
CTSB-203ENST00000420692 ZNF600Q6ZNG1 722 aa12.78□□□□□ -0.36
CTSB-203ENST00000420692 FAM231DQ6ZW35 169 aa12.78□□□□□ -0.36
CTSB-203ENST00000420692 MRPL27Q9P0M9 148 aaKnown RBP12.78□□□□□ -0.36
CTSB-203ENST00000420692 CRISP2P16562 243 aa12.77□□□□□ -0.36
CTSB-203ENST00000420692 VMO1Q7Z5L0 202 aa12.77□□□□□ -0.36
CTSB-203ENST00000420692 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.36
CTSB-203ENST00000420692 HIGD1AQ9Y241 93 aa12.77□□□□□ -0.36
CTSB-203ENST00000420692 CFAP46Q8IYW2 2715 aa12.77□□□□□ -0.37
CTSB-203ENST00000420692 TRBV9A0A0B4J1U6 114 aa12.77□□□□□ -0.37
CTSB-203ENST00000420692 C5orf64Q2M2E5 130 aa12.77□□□□□ -0.37
CTSB-203ENST00000420692 MRPL54Q6P161 138 aaKnown RBP12.77□□□□□ -0.37
CTSB-203ENST00000420692 LINC00322Q6ZN03 302 aaPredicted RBP12.77□□□□□ -0.37
CTSB-203ENST00000420692 ZNF664Q8N3J9 261 aa12.77□□□□□ -0.37
CTSB-203ENST00000420692 MLST8Q9BVC4 326 aa12.77□□□□□ -0.37
CTSB-203ENST00000420692 ZNF586Q9NXT0 402 aa12.77□□□□□ -0.37
CTSB-203ENST00000420692 ZFHX3Q15911 3703 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 SERF1AO75920 110 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 ESDP10768 282 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 CEACAM3P40198 252 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 PKIAP61925 76 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 NDPQ00604 133 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 KIAA1644Q3SXP7 199 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 C1orf122Q6ZSJ8 110 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 Q9H3A6 140 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 PRORYQ9H606 182 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 PKD1L2Q7Z442 2459 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 IZUMO1RA6ND01 250 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 VWC2LB2RUY7 222 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 RAB4BP61018 213 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 Q0VG73 95 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 Q71RC1 249 aaPredicted RBP12.76□□□□□ -0.37
CTSB-203ENST00000420692 Q8N6K4 173 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 FANCD2OSQ96PS1 177 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 NAT8BQ9UHF3 227 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms