RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 LHFPL5Q8TAF8 219 aa9.15□□□□□ -0.94
LINC00339-203ENST00000420503 ZNF705FA8MVS1 300 aaPredicted RBP9.14□□□□□ -0.95
LINC00339-203ENST00000420503 PRM2P04554 102 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 IL4P05112 153 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 HNRNPCP07910 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC00339-203ENST00000420503 ZNF705DP0CH99 300 aaPredicted RBP9.14□□□□□ -0.95
LINC00339-203ENST00000420503 ZNF705BP0CI00 300 aaPredicted RBP9.14□□□□□ -0.95
LINC00339-203ENST00000420503 RND3P61587 244 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 TNP2Q05952 138 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 KLF9Q13886 244 aaPredicted RBP9.14□□□□□ -0.95
LINC00339-203ENST00000420503 MEF2DQ14814 521 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 FAM222AQ5U5X8 452 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 LPCAT3Q6P1A2 487 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 CENPSQ8N2Z9 138 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 TERB2Q8NHR7 220 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 WDR12Q9GZL7 423 aaKnown RBP9.14□□□□□ -0.95
LINC00339-203ENST00000420503 PTTG2Q9NZH5 202 aa9.14□□□□□ -0.95
LINC00339-203ENST00000420503 C3orf85A0A1B0GTC6 90 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 F6UB75 175 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 HLA-DRB4P13762 266 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 S100GP29377 79 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 OR10J1P30954 320 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 BAK1Q16611 211 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 TRIM16LQ309B1 348 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 ZNF709Q8N972 641 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 OR13C8Q8NGS7 320 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 SLC35B3Q9H1N7 401 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 DKK2Q9UBU2 259 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 HLA-DRB4X5D2U9 266 aa9.13□□□□□ -0.95
LINC00339-203ENST00000420503 CORTO00230 105 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 BUB3O43684 328 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 SUB1P53999 127 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC00339-203ENST00000420503 SCGB2B2Q4G0G5 96 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 TMEM88Q6PEY1 159 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 SIGLEC15Q6ZMC9 328 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 TOMM5Q8N4H5 51 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 OR51S1Q8NGJ8 323 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 OR51G1Q8NGK1 321 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 DEDD2Q8WXF8 326 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 NPIPB3Q92617 1050 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 ZNF486Q96H40 463 aaPredicted RBP9.12□□□□□ -0.95
LINC00339-203ENST00000420503 NARS2Q96I59 477 aaKnown RBP9.12□□□□□ -0.95
LINC00339-203ENST00000420503 PDCD10Q9BUL8 212 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 ENY2Q9NPA8 101 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 NRN1Q9NPD7 142 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 PRR13Q9NZ81 148 aa9.12□□□□□ -0.95
LINC00339-203ENST00000420503 DISC1C4P0D8 188 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 IFNA21P01568 189 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 OR5AC1P0C628 307 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 UCP1P25874 307 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 NPY1RP25929 384 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 AP3S2P59780 193 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 SURF2Q15527 256 aaPredicted RBP9.11□□□□□ -0.95
LINC00339-203ENST00000420503 C1orf158Q8N1D5 194 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 OR1S2Q8NGQ3 325 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 MARCH1Q8TCQ1 289 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 Q8WTZ3 238 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 ACY3Q96HD9 319 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 LINC00052Q96N35 136 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 PRRT1Q99946 306 aa9.11□□□□□ -0.95
LINC00339-203ENST00000420503 YPEL3P61236 119 aaPredicted RBP9.1□□□□□ -0.95
LINC00339-203ENST00000420503 SNRPD3P62318 126 aaKnown RBP9.1□□□□□ -0.95
LINC00339-203ENST00000420503 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
LINC00339-203ENST00000420503 SLC24A4Q8NFF2 622 aa9.1□□□□□ -0.95
LINC00339-203ENST00000420503 RNASE11Q8TAA1 199 aaKnown RBP9.1□□□□□ -0.95
LINC00339-203ENST00000420503 GPR146Q96CH1 333 aa9.1□□□□□ -0.95
LINC00339-203ENST00000420503 NEU1Q99519 415 aa9.1□□□□□ -0.95
LINC00339-203ENST00000420503 NIPSNAP3BQ9BS92 247 aa9.1□□□□□ -0.95
LINC00339-203ENST00000420503 RTBDNQ9BSG5 229 aaPredicted RBP9.1□□□□□ -0.95
LINC00339-203ENST00000420503 C1QTNF4Q9BXJ3 329 aa9.1□□□□□ -0.95
LINC00339-203ENST00000420503 CACNG5Q9UF02 275 aa9.1□□□□□ -0.95
LINC00339-203ENST00000420503 GPR132Q9UNW8 380 aa9.1□□□□□ -0.95
LINC00339-203ENST00000420503 YTHDF2Q9Y5A9 579 aaKnown RBP9.1□□□□□ -0.95
LINC00339-203ENST00000420503 C16orf90A8MZG2 172 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 SOCS3O14543 225 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 PSG1P11464 419 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 IL7P13232 177 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 FAUP35544 74 aaKnown RBP9.09□□□□□ -0.95
LINC00339-203ENST00000420503 SPCS3P61009 180 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 AARDQ4LEZ3 155 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 C2orf83Q53S99 150 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 OR4B1Q8NGF8 309 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 ZFAND1Q8TCF1 268 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 C20orf173Q96LM9 149 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 PBDC1Q9BVG4 233 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 SAV1Q9H4B6 383 aaPredicted RBP9.09□□□□□ -0.95
LINC00339-203ENST00000420503 HEYLQ9NQ87 328 aaPredicted RBP9.09□□□□□ -0.95
LINC00339-203ENST00000420503 MCUBQ9NWR8 336 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 COPZ2Q9P299 210 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 SCP2D1Q9UJQ7 156 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 RFNGQ9Y644 331 aa9.09□□□□□ -0.95
LINC00339-203ENST00000420503 TRAV30A0A087WSZ9 112 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 LOC102723971A0A1B0GUV8 181 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 RPS10-NUDT3A0A1W2PQS6 291 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 TOMM40O96008 361 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 RD3LP0DJH9 198 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 PRB4P10163 310 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-203ENST00000420503 HTR2BP41595 481 aa9.08□□□□□ -0.96
LINC00339-203ENST00000420503 NKX2-1P43699 371 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms